Mercurial > repos > jjohnson > qiime
view principal_coordinates.xml @ 0:e5c3175506b7 default tip
Initial tool configs for qiime, most need work.
author | Jim Johnson <jj@umn.edu> |
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date | Sun, 17 Jul 2011 10:30:11 -0500 |
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<tool id="principal_coordinates" name="principal_coordinates" version="1.2.0"> <description>Principal Coordinates Analysis (PCoA)</description> <requirements> <requirement type="binary">principal_coordinates.py</requirement> </requirements> <command interpreter="python"> qiime_wrapper.py principal_coordinates.py --input_path=$input_path --output_path=$output_path </command> <inputs> <param name="input_path" type="data" format="qiimedistmat" label="input_path" help="path to the input distance matrix file(s) (i.e., the output from beta_diversity.py). Is a directory for batch processing and a filename for a single file operation. [REQUIRED]"/> </inputs> <outputs> <data format="qiimepca" name="output_path" label="${tool.name} on ${on_string}: coordinates"/> </outputs> <tests> </tests> <help> </help> </tool>