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Initial tool configs for qiime, most need work.
author Jim Johnson <jj@umn.edu>
date Sun, 17 Jul 2011 10:30:11 -0500
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<tool id="sort_denoiser_output" name="sort_denoiser_output" version="1.2.0">
 <description>Sort denoiser output by cluster size.</description>
 <requirements>
  <requirement type="binary">sort_denoiser_output.py</requirement>
 </requirements>
 <command interpreter="python">
  qiime_wrapper.py
  --galaxy_tmpdir='$__new_file_path__'
  sort_denoiser_output.py
  --input_fasta_fp=$input_fasta_fp
  --output_file=$output_file
 </command>
 <inputs>
  <param name="input_fasta_fp" type="data" format="fasta" label="input_fasta_fp"
   help="path to the input fasta file [REQUIRED]"/>
 </inputs>
 <outputs>
  <data format="txt" name="output_file"/>
 </outputs>
 <tests>
 </tests>
 <help>
  
 </help>
</tool>