Mercurial > repos > jjohnson > rsem

comparison rsem_calculate_expression.xml @ 3:59459de65740

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
mv RSEM datatypes to separate repository, remove samtools dependency
author Jim Johnson <jj@umn.edu>
date Mon, 10 Mar 2014 07:19:56 -0500
parents 5949673f9e3e
children 30a8343fb0e7
comparison
equal deleted inserted replaced
2:5949673f9e3e 3:59459de65740
1 <tool id="rsem_calculate_expression" name="RSEM calculate expression" version="1.1.17"> 1 <tool id="rsem_calculate_expression" name="RSEM calculate expression" version="1.1.17">
2 <description>RNA-Seq by Expectation-Maximization</description> 2 <description>RNA-Seq by Expectation-Maximization</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.1.17">rsem</requirement> 4 <requirement type="package" version="1.1.17">rsem</requirement>
5 <requirement type="package" version="0.1.19">samtools</requirement>
6 <requirement type="package" version="1.0.0">bowtie</requirement> 5 <requirement type="package" version="1.0.0">bowtie</requirement>
7 </requirements> 6 </requirements>
8 <command> 7 <command>
9 rsem-calculate-expression 8 rsem-calculate-expression
10 ## --tag string 9 ## --tag string