Mercurial > repos > jjohnson > shear
comparison shear_sv.xml @ 3:7506693aff3b default tip
Update to SHEAR version 0.2.11
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Mon, 14 Jul 2014 10:22:20 -0500 |
| parents | b84716da5595 |
| children |
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| 2:b84716da5595 | 3:7506693aff3b |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool id="shear_sv" name="SHEAR-SV" version="0.0.9"> | 2 <tool id="shear_sv" name="SHEAR-SV" version="0.0.11"> |
| 3 <description>find SVs and estimate the heterogeneity levels from a BAM</description> | 3 <description>find SVs and estimate the heterogeneity levels from a BAM</description> |
| 4 <requirements> | 4 <requirements> |
| 5 <requirement type="package" version="0.2.9">shear</requirement> | 5 <requirement type="package" version="0.2.11">shear</requirement> |
| 6 <requirement type="package" version="0.1.19">samtools</requirement> | 6 <requirement type="package" version="0.1.19">samtools</requirement> |
| 7 <requirement type="package" version="0.6.2">bwa</requirement> | 7 <requirement type="package" version="0.6.2">bwa</requirement> |
| 8 <requirement type="package" version="1.0.1">crest</requirement> | 8 <requirement type="package" version="1.0.1">crest</requirement> |
| 9 <requirement type="package" version="latest">blat_server</requirement> | 9 <requirement type="package" version="latest">blat_server</requirement> |
| 10 <requirement type="package" version="3">cap3</requirement> | 10 <requirement type="package" version="3">cap3</requirement> |