Mercurial > repos > jjohnson > snpeff

annotate test-data/annotate_5.vcf @ 9:937367efb1da default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Change tool dependency to package_snpeff_3_2, now uses environment variable: SNPEFF_JAR_PATH for the location of snpeff jar files.
author Jim Johnson <jj@umn.edu>
date Wed, 18 Sep 2013 10:49:56 -0500
parents 192a236898f5
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
5
192a236898f5 Add test cases for SnpSift
Jim Johnson <jj@umn.edu>
parents:
diff changeset
1 1 872687 rs76166080 C G . . .
192a236898f5 Add test cases for SnpSift
Jim Johnson <jj@umn.edu>
parents:
diff changeset
2 1 970878 . C T . . .
192a236898f5 Add test cases for SnpSift
Jim Johnson <jj@umn.edu>
parents:
diff changeset
3 1 979690 rs115413462 G A . . .
192a236898f5 Add test cases for SnpSift
Jim Johnson <jj@umn.edu>
parents:
diff changeset
4 1 1160967 . C T . . .
192a236898f5 Add test cases for SnpSift
Jim Johnson <jj@umn.edu>
parents:
diff changeset
5 1 1195966 rs114569001 G A . . .