Mercurial > repos > jjohnson > snpeff

annotate test-data/test.private.02.vcf @ 9:937367efb1da default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Change tool dependency to package_snpeff_3_2, now uses environment variable: SNPEFF_JAR_PATH for the location of snpeff jar files.
author Jim Johnson <jj@umn.edu>
date Wed, 18 Sep 2013 10:49:56 -0500
parents 192a236898f5
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
5
192a236898f5 Add test cases for SnpSift
Jim Johnson <jj@umn.edu>
parents:
diff changeset
1 ##fileformat=VCFv4.0
192a236898f5 Add test cases for SnpSift
Jim Johnson <jj@umn.edu>
parents:
diff changeset
2 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT id1 id2
192a236898f5 Add test cases for SnpSift
Jim Johnson <jj@umn.edu>
parents:
diff changeset
3 1 123456 . A G . . AF=0 GT 1/1 1/1