Mercurial > repos > jjohnson > snpeff
view tool_dependencies.xml @ 6:ec16dae84230
Fix tests for SnpSift caseControl and intervals
author | Jim Johnson <jj@umn.edu> |
---|---|
date | Tue, 26 Mar 2013 15:24:30 -0500 |
parents | 192a236898f5 |
children | 13b6ad2ddace |
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<?xml version="1.0"?> <tool_dependency> <package name="snpEff" version="3.1"> <install version="1.0"> <actions> <action type="download_by_url">http://sourceforge.net/projects/snpeff/files/snpEff_v3_1_core.zip</action> <action type="move_directory_files"> <source_directory>.</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> <action type="set_environment"> <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable> </action> <action type="set_environment"> <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/scripts</environment_variable> </action> </actions> </install> <readme> </readme> </package> </tool_dependency>