Mercurial > repos > john-mccallum > dnaclust

comparison fastaselect.xml @ 1:8d31c21e4f28 draft

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Uploaded fastaselect.xml with trivial but critical fix
author john-mccallum
date Wed, 26 Jun 2013 22:07:53 -0400
parents 84be1fe7e34a
children 17a8f8670dc9
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0:84be1fe7e34a 1:8d31c21e4f28
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="fastaselect_1" name="fastaselectclust"> 2 <tool id="fastaselect_1" name="fastaselectclust">
3 <description>Get Fasta file of cluster centres from DNAclust output</description> 3 <description>Get Fasta file of cluster centres from DNAclust output</description>
4 <command>cat inputClusterFile | fastaselect -c -f $inputFastaFile > $outputfile </command> 4 <command>cat $inputClusterFile | fastaselect -c -f $inputFastaFile > $outputfile </command>
5 <inputs> 5 <inputs>
6 <param format="fasta" name="inputFastaFile" type="data" label="Fasta input file"/> 6 <param format="fasta" name="inputFastaFile" type="data" label="Fasta input file"/>
7 <param format="tabular" name="inputClusterFile" type="data" label=" Cluster input file from DNAclust"/> 7 <param format="tabular" name="inputClusterFile" type="data" label=" Cluster input file from DNAclust"/>
8 8
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