# HG changeset patch
# User john-mccallum
# Date 1372301161 14400
# Node ID 0b4f4d41b47b00916cca2ced0f9aaec2d73e42c0
# Parent  37acb97e423f8bc0b886a63fc64003a444d8a180
Uploaded

diff -r 37acb97e423f -r 0b4f4d41b47b fastaselect.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/fastaselect.xml	Wed Jun 26 22:46:01 2013 -0400
@@ -0,0 +1,24 @@
+<?xml version="1.0"?>
+<tool id="fastaselect_1" name="fastaselectclust">
+  <description>Get Fasta file of cluster centres from DNAclust output</description>
+ <command interpreter="bash">fastaselect.sh $inputFastaFile $inputClusterFile  $outputfile</command>
+  <inputs>
+    <param format="fasta" name="inputFastaFile" type="data" label="Fasta input file"/>
+    <param format="text" name="inputClusterFile" type="data" label=" Cluster input file from DNAclust"/>
+
+
+  </inputs>
+  <outputs>
+
+     <data format="fasta" name="outputfile" />
+  </outputs>
+
+<help>
+
+This tool returns a fasta file containing a subset of sequences from an input mult-fasta file and a list of identifiers.
+
+It was developed as part of the DNACLUST package http://dnaclust.sourceforge.net/  for use in retrieving cluster centres but is handy for any extraction of a sequence subset from Galaxy tabular output
+
+</help>
+</tool>
+