Mercurial > repos > john-mccallum > pcr_markers

diff vcf_gff.xml @ 5:b321e0517be3 draft

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Uploaded
author ben-warren
date Thu, 22 May 2014 20:30:19 -0400
parents a0689dc29b7f
children
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--- a/vcf_gff.xml	Thu Oct 18 19:47:07 2012 -0400
+++ b/vcf_gff.xml	Thu May 22 20:30:19 2014 -0400
@@ -8,6 +8,16 @@
   <outputs>
      <data format="gff3" name="outputfile" />
   </outputs>
+  <tests>
+        <test>
+                <param name="inputVcf" value="mpileup_out.vcf" ftype="vcf"/>
+                <output name="outputfile" file="mpileup_vcf_to_gff_output.gff"/>
+        </test>
+        <test>
+                <param name="inputVcf" value="freebayes_out.vcf" ftype="vcf"/>
+                <output name="outputfile" file="freebayes_vcf_to_gff_output.gff"/>
+        </test>
+  </tests>
 <help>
 
 ** Convert vcf to gff3**
@@ -58,4 +68,4 @@
 Ross Crowhurst, Mark Fiers, Leshi Chen, Richard MacKnight, John A. McCallum
 
 </help>
-</tool>
\ No newline at end of file
+</tool>