Mercurial > repos > jose_duarte > phagedpo

comparison DPOGALAXY.py @ 38:9558da071ec9 draft

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Uploaded
author jose_duarte
date Thu, 31 Aug 2023 14:30:31 +0000
parents a662eb3f87c2
children 1a450881f456
comparison
equal deleted inserted replaced
37:10b8c91f55fd 38:9558da071ec9
146 146
147 if __name__ == '__main__': 147 if __name__ == '__main__':
148 __location__ = os.path.realpath(os.path.join(os.getcwd(), os.path.dirname(__file__))) 148 __location__ = os.path.realpath(os.path.join(os.getcwd(), os.path.dirname(__file__)))
149 149
150 model = 'svm1495' 150 model = 'svm1495'
151 fasta_file = sys.argv[2] 151 fasta_file = sys.argv[1]
152
153 #model = "C:/Users/biosy/Desktop/phageDPO/DPO/svm1495"
154 #fasta_file = "C:/Users/biosy/Downloads/bacillus.fasta"
155 152
156 PDPO = PDPOPrediction(__location__, model, fasta_file) 153 PDPO = PDPOPrediction(__location__, model, fasta_file)
157 PDPO.Datastructure() 154 PDPO.Datastructure()
158 PDPO.Prediction() 155 PDPO.Prediction()