comparison filler.py @ 4:82569b47df8d draft

planemo upload
author jowong
date Mon, 29 Oct 2018 07:52:12 -0400
parents
children 63f3743c2ae4
comparison
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3:dde3036465de 4:82569b47df8d
1 #!/usr/bin/env python
2
3 import sys
4 import argparse as ap
5
6 parser = ap.ArgumentParser(prog='filler', conflict_handler='resolve',
7 description="produce filler collection to deal with galaxy handling")
8
9 input = parser.add_argument_group('Input', '')
10 input.add_argument('-i', '--input', nargs=1, required=True, help="Paths to forward reads")
11 input.add_argument('-o', '--output', nargs=1, required=True, help="output")
12
13 if len(sys.argv) == 0:
14 parser.print_usage()
15 sys.exit(1)
16
17 args = parser.parse_args()
18 output = open(args.output[0], 'w')
19 output.write(args.input[0])
20 output.write("\n")