# HG changeset patch
# User jowong
# Date 1540221025 14400
# Node ID b98b3e9da1463c18bf86703dbdca30e32da5f98e

planemo upload

diff -r 000000000000 -r b98b3e9da146 prince.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/prince.xml	Mon Oct 22 11:10:25 2018 -0400
@@ -0,0 +1,42 @@
+<tool id="prince" name="VNTR copy number approximation" version="0.1.0">
+    <requirements>
+        <requirement type="package" version="1.0">prince</requirement>
+    </requirements>
+    <command detect_errors="exit_code"><![CDATA[
+        prince -tf "$input1" -to "$output1"
+    ]]></command>
+    <inputs>
+        <param type="data" name="input1" format="txt" />
+    </inputs>
+    <outputs>
+        <data name="output1" format="txt" />
+    </outputs>
+    <tests>
+        <test>
+            <param name="input1" value="prince_input.txt"/>
+            <output name="output1" file="prince_output.txt"/>
+        </test>
+    </tests>
+    <help><![CDATA[
+        usage: prince [-h] [-bo BOOST_OUTPUT] [-to TARGET_OUTPUT] [-tmp TEMPLATES]
+              [-tf TARGET_FILE] [-bf BOOSTING_FILE] [-k K] [-cn COPYNUMBER]
+
+	Prince Options.
+
+	optional arguments:
+	  -h, --help            show this help message and exit
+          -bo                    time
+
+    ]]></help>
+    <citations>
+        <citation type="bibtex">
+@misc{githubPythonPRINCE,
+  author = {LastTODO, FirstTODO},
+  year = {TODO},
+  title = {PythonPRINCE},
+  publisher = {GitHub},
+  journal = {GitHub repository},
+  url = {https://github.com/WGS-TB/PythonPRINCE},
+}</citation>
+    </citations>
+</tool>