# HG changeset patch
# User jowong
# Date 1540826674 14400
# Node ID 55e3a2bbcde6ba1241d83529d74f83d1e5d2362b
planemo upload
diff -r 000000000000 -r 55e3a2bbcde6 macros.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml Mon Oct 29 11:24:34 2018 -0400
@@ -0,0 +1,25 @@
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+ snippy
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+ 3.2
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+ @UNPUBLISHED{Seemann2013,
+ author = "Seemann T",
+ title = "snippy: fast bacterial variant calling from NGS reads",
+ year = "2015",
+ note = "https://github.com/tseemann/snippy",
+ url = "https://github.com/tseemann/snippy"}
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diff -r 000000000000 -r 55e3a2bbcde6 snippy.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/snippy.xml Mon Oct 29 11:24:34 2018 -0400
@@ -0,0 +1,179 @@
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+ Snippy finds SNPs between a haploid reference genome and your NGS sequence reads.
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+ macros.xml
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+ outputs and 'outvcf' in outputs
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+ outputs and 'outgff' in outputs
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+ outputs and 'outtab' in outputs
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+ outputs and 'outsum' in outputs
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+ outputs and 'outlog' in outputs
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+ outputs and 'outaln' in outputs
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+ outputs and 'outcon' in outputs
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+ outputs and 'outdep' in outputs
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+ outputs and 'outbam' in outputs
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