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comparison spotyping_postprocess.xml @ 0:7412632c7b0e draft

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author jowong
date Tue, 13 Nov 2018 10:46:18 -0500
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1 <tool id="spotyping_postprocess" name="Spotyping Postprocess" version="1.0.0">
2 <description>Postprocess spotyping galaxy output</description>
3 <command interpreter="python"><![CDATA[
4 spotyping_postprocess.py -s #for $path in $paths# $path.element_identifier #end for# -f #for $path in $paths# $path #end for#
5 ]]></command>
6 <inputs>
7 <param name="paths" type="data" format="txt" label="Collection of files" help="" optional="False" multiple="True"/>
8 </inputs>
9 <outputs>
10 <data name="output" format="txt" from_work_dir="spotyping_postprocess_output.txt"/>
11 </outputs>
12 <help>
13 This tool processes the spotyping galaxy output such that it is in line with the command line
14 </help>
15 <citations>
16 </citations>
17 </tool>