Mercurial > repos > jpetteng > ectyper1_0

annotate ectyper @ 2:338b07ddaa10 draft

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Changed to only use one fastq when paired is selected - otherwise need to make workflow to handle concatenation
author jpetteng
date Wed, 10 Jan 2018 16:12:13 -0500
parents dbcc6d233eed
children
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1 #!/usr/bin/env python
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2
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3 """
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4 Shell program for ectyper
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5 """
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6 import sys
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7 import os
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8 sys.path.append(os.path.join(os.path.dirname(__file__), ".."))
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9
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10 from ectyper import ectyper
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11
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12 if __name__=='__main__':
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13 ectyper.run_program()