Mercurial > repos > jvolkening > b2b_fq_deinterleave

annotate test-data/summarize.strip.txt @ 1:3cab918bc851 draft default tip

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planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit f66b297dfee0d16df8f185c075fe349b8c6b3203
author jvolkening
date Fri, 08 Mar 2024 01:49:12 +0000
parents b42eb9ff6a8c
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
1 ----------------------------------------
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
2 Summary
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
3 ----------------------------------------
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
4 number of scaffolds: 10
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
5 total length: 27689
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
6 average length: 2769
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
7 G/C content: 50%
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
8 ambiguous content: 12%
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
9 longest scaffold: 5980
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
10 N50: 4945
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
11 N90: 1997
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
12 N95: 1197
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
13 shortest scaffold: 209
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
14 NOTE: Ns were stripped for above calculations
b42eb9ff6a8c planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
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15 ----------------------------------------