Mercurial > repos > jvolkening > b2b_fq_interleave

annotate test-data/summarize.strip.txt @ 0:6530b8a73225 draft default tip

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planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
author jvolkening
date Fri, 08 Mar 2024 00:48:17 +0000
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
1 ----------------------------------------
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
2 Summary
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
3 ----------------------------------------
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
4 number of scaffolds: 10
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
5 total length: 27689
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
6 average length: 2769
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
7 G/C content: 50%
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
8 ambiguous content: 12%
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
9 longest scaffold: 5980
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
10 N50: 4945
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
11 N90: 1997
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
12 N95: 1197
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
13 shortest scaffold: 209
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
diff changeset
14 NOTE: Ns were stripped for above calculations
6530b8a73225 planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
jvolkening
parents:
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15 ----------------------------------------