Mercurial > repos > jvolkening > b2b_sync_reads

diff sync_reads.xml @ 1:e8df16b34fec draft default tip

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planemo upload for repository https://github.com/jvolkening/galaxy-tools/tree/master/tools/b2b_utils commit 9260aa02a5f703bce63d2db5b69003df9be371ac
author jvolkening
date Fri, 08 Mar 2024 00:44:37 +0000
parents c97a821e54f3
children
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--- a/sync_reads.xml	Sat Mar 02 07:44:26 2024 +0000
+++ b/sync_reads.xml	Fri Mar 08 00:44:37 2024 +0000
@@ -1,16 +1,21 @@
-<tool id="b2b_sync_reads" name="Sync paired reads" version="0.005">
+<tool id="b2b_sync_reads" name="Sync paired reads"
+    version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" license="MIT" profile="21.01">
 
     <description>Synchronize trimmed/filtered read-pair set</description>
-
-    <!-- ***************************************************************** -->
-
-    <requirements>
-        <requirement type="package" version="0.019">b2b-utils</requirement>
-    </requirements>
-
-    <!-- ***************************************************************** -->
-
-    <version_command>sync_reads --version | perl -wnE'print "$1\n" for /sync_reads v(.+)/g'</version_command>
+    <macros>
+        <token name="@TOOL_NAME@">sync_reads</token>
+        <token name="@TOOL_VERSION@">0.005</token>
+        <token name="@VERSION_SUFFIX@">1</token>
+        <import>macros.xml</import>
+    </macros>
+    <edam_topics>
+        <edam_topic>topic_0080</edam_topic> <!-- Sequence analysis -->
+    </edam_topics>
+    <edam_operations>
+        <edam_operation>operation_0335</edam_operation> <!-- Formatting -->
+    </edam_operations>
+    <expand macro="requirements" />
+    <expand macro="version_command" />
 
     <!-- ***************************************************************** -->