Mercurial > repos > kaymccoy > enhanced_bowtie_mapper

comparison bowtie_out10.sam @ 28:1f18affa6d03 draft

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author kaymccoy
date Sun, 07 Aug 2016 22:34:57 -0400
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27:c52b676c87ec 28:1f18affa6d03
1 Dummy:1:1:1570:620 141 * 0 0 * * 0 0 CTTGCGTTTATGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCT IIIIIII""IIIIIIIIIIIIIBIIIIIIIIIIII?I0IIIIHIIIGIII XM:i:0
2 Dummy:1:1:1570:620 77 * 0 0 * * 0 0 GAGTAACAAAGTAAAGTTTGGACCGTTTTTGTCTCGTGCTCGTCGCTGCG IIIIIII""IIIIIIIIIIIIIBIIIIIIIIIIII"IIIIIII000IIII XM:i:0
3 Dummy:1:1:1572:270 131 phiX174 3577 255 50M = 3518 -109 ACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATG IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
4 Dummy:1:1:1572:270 67 phiX174 3518 255 50M = 3577 109 TGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTA IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
5 Dummy:1:1:1572:324 141 * 0 0 * * 0 0 GCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGT IIIIIII""IIIIIIIIIIIIIIIIIIII+7I05I?I0IIIIHIIIGIII XM:i:0
6 Dummy:1:1:1572:324 77 * 0 0 * * 0 0 AAGGTGCTTAAATTCGTGGGTCCTGAGCTGGCGACCCTGTTTTGTATGGC IIIIIII""IIIIIIIIIIIIIIIIIIII+7I05I"IIIIIII000IIII XM:i:0
7 Dummy:1:1:1578:331 131 phiX174 268 255 50M = 209 -109 AAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCT IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
8 Dummy:1:1:1578:331 67 phiX174 209 255 50M = 268 109 TGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGC IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
9 Dummy:1:1:1582:633 141 * 0 0 * * 0 0 TCTATTGACATTATGGGTCTGCAAGCTGCTTTTTTTTTTTTTTTTTTTTT IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII?I0IIIIHIIIGIII XM:i:0
10 Dummy:1:1:1582:633 77 * 0 0 * * 0 0 CCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCAC IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XM:i:0
11 Dummy:1:1:1598:534 131 phiX174 1772 255 50M = 1717 -105 TTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCC IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
12 Dummy:1:1:1598:534 67 phiX174 1717 255 50M = 1772 105 GCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAA IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
13 Dummy:1:1:1599:330 131 phiX174 868 255 50M = 803 -115 TTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGCA IIIIIII""IIIIIIIIIIIIIIIIIII<III@II?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
14 Dummy:1:1:1599:330 67 phiX174 803 255 50M = 868 115 AGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTC IIIIIII""IIIIIIIIIIIIIIIIIII<III@II"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
15 Dummy:1:1:1616:363 131 phiX174 2773 255 50M = 2718 -105 GTGACTATTGACGTCCTTCCCCGTACGCCGGGCAATAATGTTTATGTTGG IIIIIII""IIIIIIIIIIIIIIIIIIIIIIDIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
16 Dummy:1:1:1616:363 67 phiX174 2718 255 50M = 2773 105 TGTTTATCCTTTGAATGGTCGCCATGATGGTGGTTATTATACCGTCAAGG IIIIIII""IIIIIIIIIIIIIIIIIIIIIIDIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
17 Dummy:1:1:1629:446 131 phiX174 2355 255 50M = 2301 -104 CAAGCGAAGCGCGGTAGGTTTTCTGCTTAGGAGTTTAATCATGTTTCAGA IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
18 Dummy:1:1:1629:446 67 phiX174 2301 255 50M = 2355 104 AGGTTATAACGCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGT IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
19 Dummy:1:1:1634:330 131 phiX174 4473 255 50M = 4418 -105 TCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTACTAT IIIIIII""IIIIIIIIIIIIIIIIIIIIIII8II?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
20 Dummy:1:1:1634:330 67 phiX174 4418 255 50M = 4473 105 GGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATG IIIIIII""IIIIIIIIIIIIIIIIIIIIIII8II"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
21 Dummy:1:1:1647:512 131 phiX174 451 255 50M = 401 -100 TTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTTTCTG IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
22 Dummy:1:1:1647:512 67 phiX174 401 255 50M = 451 100 TACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCA IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
23 Dummy:1:1:1652:270 141 * 0 0 * * 0 0 GCTTCGGCCCCTTACTTGAGGATAAATTATGTCTAATATTCAAACTGGCG IIIIIII""IIIIIIIIIIIIIIIIIIIIIII6II?I0IIIIHIIIGIII XM:i:0
24 Dummy:1:1:1652:270 77 * 0 0 * * 0 0 AGCGTAAAGGCGCTCGTCTTTGGTATGTAGGACTTTGCATTGTTTAATTG IIIIIII""IIIIIIIIIIIIIIIIIIIIIII6II"IIIIIII000IIII XM:i:0
25 Dummy:1:1:1673:514 131 phiX174 4072 255 50M = 4018 -104 GCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATG IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIII1?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
26 Dummy:1:1:1673:514 67 phiX174 4018 255 50M = 4072 104 ATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATTGAGGCT IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIII1"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
27 Dummy:1:1:1746:351 141 * 0 0 * * 0 0 CCACTCCTCTCCCGACTGTGTGTGTGTGTGTTTATATTGACCATGCCGCT IIIIIII""IIIIIIIIIIIIIIIIII?I0IIIIHIIIGIIIIIIIIIII XM:i:0
28 Dummy:1:1:1746:351 77 * 0 0 * * 0 0 CTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGT IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XM:i:0
29 Dummy:1:1:1749:466 131 phiX174 2251 255 50M = 2201 -100 GCCGACCACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTG IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
30 Dummy:1:1:1749:466 67 phiX174 2201 255 50M = 2251 100 TTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCT IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
31 Dummy:1:1:1761:343 131 phiX174 69 255 50M = 5 -114 TTGATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGG IIIIIII""IIIIIII0II?I""IIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
32 Dummy:1:1:1761:343 67 phiX174 5 255 50M = 69 114 TTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGA IIIIIII""IIIIIIIIIII?I0IIIIHIIIGIIIII0II?I""IIIIII XA:i:0 MD:Z:50 NM:i:0
33 Dummy:1:1:1763:587 131 phiX174 2566 255 50M = 2501 -115 CATTGCATTCAGATGGATACATCTGTCAACGCCGCTAATCAGGTTGTTTC IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
34 Dummy:1:1:1763:587 67 phiX174 2501 255 50M = 2566 115 AAGCTACATCGTCAACGTTATATTTTGATAGTTTGACGGTTAATGCTGGT IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0
35 Dummy:1:1:1768:715 131 phiX174 3173 255 50M = 3118 -105 AGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATA IIIIIII""IIIIIIIIIIIIIDIIIIIIIIIIII?I0IIIIHIIIGIII XA:i:0 MD:Z:50 NM:i:0
36 Dummy:1:1:1768:715 67 phiX174 3118 255 50M = 3173 105 ACCCTGATGAGGCCGCCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCT IIIIIII""IIIIIIIIIIIIIDIIIIIIIIIIII"IIIIIII000IIII XA:i:0 MD:Z:50 NM:i:0