Mercurial > repos > kevyin > homer

changeset 25:b6ea27745c45 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author kevyin
date Thu, 20 Dec 2012 18:25:12 -0500
parents b3b65304ee72
children 0bc4439da640
files tool_dependencies.xml
diffstat 1 files changed, 24 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Dec 20 18:25:12 2012 -0500
@@ -0,0 +1,24 @@
+<?xml version="1.0"?>
+<tool_dependency>
+  <package name="homer" version="4.1">
+    <install version="4.1">
+      <actions>
+        <action type="download_by_url">http://biowhat.ucsd.edu/homer/configureHomer.pl</action>
+        <action type="shell_command">perl ./configureHomer.pl -install</action>
+        <!--<action type="shell_command">perl ./configureHomer.pl -install hg19</action>-->
+        <action type="move_directory_files">
+          <source_directory>./</source_directory>
+          <destination_directory>$INSTALL_DIR</destination_directory>
+        </action>
+        <action type="set_environment">
+          <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+        </action>
+      </actions>
+    </install>
+    <readme>
+      I'm sorry but this does not work
+      
+    </readme>
+  </package>
+</tool_dependency>
+