Mercurial > repos > kevyin > meme_chip

diff tool_dependencies.xml @ 18:2948554ae3d7 draft default tip

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added nmeme option
author kevyin
date Thu, 22 Nov 2012 20:27:29 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Nov 22 20:27:29 2012 -0500
@@ -0,0 +1,19 @@
+<?xml version="1.0"?>
+<tool_dependency>
+  <package name="meme" version="4.9.0">
+    <install version="1.0">
+      <actions>
+        <action type="download_by_url">ftp://ftp.ebi.edu.au/pub/software/MEME/r4.9.0/rc5/meme_4.9.0.tar.gz</action>
+        <action type="shell_command">./configure --prefix=$INSTALL_DIR</action>
+        <action type="shell_command">make</action>
+        <action type="shell_command">make install</action>
+        <action type="set_environment">
+          <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+        </action>
+      </actions>
+    </install>
+    <readme>
+      Skeleton file for meme install. Does not actually install meme.
+    </readme>
+  </package>
+</tool_dependency>