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comparison gbsx_demultiplexer.xml @ 21:32ee036c156a draft

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Uploaded
author koen
date Wed, 13 Jan 2016 11:47:58 -0500
parents 9dc99f2deb3d
children 3b325560887b
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20:609ad9165ba2 21:32ee036c156a
1 <tool id="gbsx_demultiplexer" name="GBSX: Demultiplexer" force_history_refresh="True" version="1.1.5"> 1 <tool id="gbsx_demultiplexer" name="GBSX: Demultiplexer" force_history_refresh="True" version="1.1.5">
2 <description>demultiplexes inline barcodes from GBS and RAD experiments</description> 2 <description>demultiplexes inline barcodes from GBS and RAD experiments</description>
3 <requirements> 3 <requirements>
4 <requirement type="set_environment">GBSX_PATH</requirement>
5 <requirement type="package" version="1.1.5">GBSX</requirement> 4 <requirement type="package" version="1.1.5">GBSX</requirement>
6 </requirements> 5 </requirements>
7 <command interpreter="sh"> 6 <command interpreter="sh">
8 #if $singleOrPaired.SR_PE_select=="SR" 7 #if $singleOrPaired.SR_PE_select=="SR"
9 gbsx_demultiplexer.sh $SR_Read 0 $info_file $barcodeMismatch $enzymeMismatch $rad_gbs_select $demultiplex_stats 8 gbsx_demultiplexer.sh $SR_Read 0 $info_file $barcodeMismatch $enzymeMismatch $rad_gbs_select $demultiplex_stats