# HG changeset patch
# User koen
# Date 1452702496 18000
# Node ID 59c5f45c9ebf3740bcb02eadba66a38c8cc240e9
# Parent  4aaff8f562c1c95f0788ac5c82f5c9d3097ffc30
Uploaded

diff -r 4aaff8f562c1 -r 59c5f45c9ebf gbsx_barcodeGenerator.sh
--- a/gbsx_barcodeGenerator.sh	Wed Jan 13 11:26:26 2016 -0500
+++ b/gbsx_barcodeGenerator.sh	Wed Jan 13 11:28:16 2016 -0500
@@ -8,7 +8,7 @@
 barcode_list=$3
 barcode_summary=$4
 
-java -jar $GBSX_PATH/GBSX.jar --BarcodeGenerator -b $barcode -e $enzyme
+java -jar $GBSX_ROOT_DIR/GBSX.jar --BarcodeGenerator -b $barcode -e $enzyme
 
 awk '{print "sample" NR "\t" $1 "\t" var;}' var="$enzyme" barcode_list.txt > $barcode_list
 cat barcode_summary.txt > $barcode_summary