# HG changeset patch # User koen # Date 1452703647 18000 # Node ID 84737a8fddb0d70056e06683463f96652467965a # Parent efd8c94168d43e582b7ce268791302ce113eb658 Uploaded diff -r efd8c94168d4 -r 84737a8fddb0 gbsx_barcodeGenerator.sh --- a/gbsx_barcodeGenerator.sh Wed Jan 13 11:47:17 2016 -0500 +++ b/gbsx_barcodeGenerator.sh Wed Jan 13 11:47:27 2016 -0500 @@ -8,7 +8,7 @@ barcode_list=$3 barcode_summary=$4 -java -jar $GBSX_ROOT_PATH/GBSX.jar --BarcodeGenerator -b $barcode -e $enzyme +java -jar $GBSX_PATH/GBSX.jar --BarcodeGenerator -b $barcode -e $enzyme awk '{print "sample" NR "\t" $1 "\t" var;}' var="$enzyme" barcode_list.txt > $barcode_list cat barcode_summary.txt > $barcode_summary