Mercurial > repos > kpbioteam > ewastools

diff minfi_getsnp.xml @ 75:9c6fbb7d5a2a draft

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planemo upload for repository https://github.com/kpbioteam/ewas_galaxy commit 9ce5c86f66f4a0cb64a1b8f48a2a937268b62064-dirty
author kpbioteam
date Mon, 20 May 2019 07:14:26 -0400
parents 4caf1f2a4a65
children
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--- a/minfi_getsnp.xml	Thu May 16 08:56:35 2019 -0400
+++ b/minfi_getsnp.xml	Mon May 20 07:14:26 2019 -0400
@@ -12,7 +12,7 @@
     ]]>
     </command>
     <configfiles>
-    <configfile name="minfi_snp_script"><![CDATA[
+        <configfile name="minfi_snp_script"><![CDATA[
 require("minfi", quietly = TRUE)
 
 GRSet <- get(load('$grset'))
@@ -21,11 +21,11 @@
 
 write.table(snps, '$table')
   ]]> 
-    </configfile>
+        </configfile>
     </configfiles> 
-<inputs>
-        <param type="data" name="grset" format="rdata" label="Data Mapped To The Genome" help="This class (GenomicRatioSet) holds preprocessed data for Illumina methylation microarrays, mapped to a genomic
-location."/>
+    <inputs>
+        <param type="data" name="grset" format="rdata" label="Data Mapped To The Genome"
+            help="This class (GenomicRatioSet) holds preprocessed data for Illumina methylation microarrays, mapped to a genomic location."/>
     </inputs>
     <outputs>
         <data name="table" format="txt" label="SNPInfo Table"/>