Mercurial > repos > kpbioteam > ewastools

diff minfi_ppquantile.xml @ 75:9c6fbb7d5a2a draft

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planemo upload for repository https://github.com/kpbioteam/ewas_galaxy commit 9ce5c86f66f4a0cb64a1b8f48a2a937268b62064-dirty
author kpbioteam
date Mon, 20 May 2019 07:14:26 -0400
parents f47e5cca1696
children
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--- a/minfi_ppquantile.xml	Thu May 16 08:56:35 2019 -0400
+++ b/minfi_ppquantile.xml	Mon May 20 07:14:26 2019 -0400
@@ -12,7 +12,7 @@
     ]]>
     </command>
     <configfiles>
-    <configfile name="minfi_pp_script"><![CDATA[
+        <configfile name="minfi_pp_script"><![CDATA[
 require("minfi", quietly = TRUE)
 RGSet <- get(load('$rgset'))
 
@@ -24,10 +24,11 @@
 save(GRSet,file = '$grset')
 
 ]]> 
-    </configfile>
-    </configfiles> 
- <inputs>
-        <param type="data" name="rgset" format="rdata" label="RGChannelSet" help="These classes represents raw (unprocessed) data from a two color micro array; specifically an Illumina methylation array." />
+        </configfile>
+    </configfiles>
+    <inputs>
+        <param type="data" name="rgset" format="rdata" label="RGChannelSet"
+            help="These classes represents raw (unprocessed) data from a two color micro array; specifically an Illumina methylation array." />
     </inputs>
     <outputs>
         <data name="grset" format="rdata" label="GenomicRatioSet"/>