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comparison GEMBASSY-1.0.3/acd/gp2.acd @ 0:8300eb051bea draft

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Initial upload
author ktnyt
date Fri, 26 Jun 2015 05:19:29 -0400
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-1:000000000000 0:8300eb051bea
1 application: gp2 [
2 documentation: "Calculates the P2 index of each gene"
3 groups: "Nucleic:Codon usage"
4 embassy: "gembassy"
5 relations: "EDAM_operation:0286 Codon usage analysis"
6 relations: "EDAM_topic:0107 Codon usage analysis"
7 ]
8
9 section: input [
10 information: "Input section"
11 type: "page"
12 ]
13
14 seqall: sequence [
15 parameter: "Y"
16 type: "nucleotide"
17 features: "Y"
18 relations: "EDAM_data:0849 Sequence record"
19 ]
20
21 endsection: input
22
23 section: advanced [
24 information: "Advanced section"
25 type: "page"
26 ]
27
28 boolean: accid [
29 information: "Include to use sequence accession ID as query"
30 default: "N"
31 ]
32
33 endsection: advanced
34
35 section: output [
36 information: "Output section"
37 type: "page"
38 ]
39
40 outfile: outfile [
41 parameter: "Y"
42 information: "Codon usage output file"
43 knowntype: "codon usage"
44 relations: "EDAM_data:2865 Codon usage bias"
45 ]
46
47 endsection: output