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comparison GEMBASSY-1.0.3/acd/gcgr.acd @ 2:8947fca5f715 draft default tip

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author ktnyt
date Fri, 26 Jun 2015 05:21:44 -0400
parents 84a17b3fad1f
children
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1:84a17b3fad1f 2:8947fca5f715
1 application: gcgr [
2 documentation: "Creates a Chaos Game Representation of a given sequence"
3 groups: "Display"
4 embassy: "gembassy"
5 relations: "EDAM_topic:0092 Data visualisation"
6 relations: "EDAM_topic:0157 Sequence composition analysis"
7 relations: "EDAM_operation:0377 Sequence composition calculation
8 (nucleic acid)"
9 ]
10
11 section: input [
12 information: "Input section"
13 type: "page"
14 ]
15
16 seqall: sequence [
17 parameter: "Y"
18 type: "nucleotide"
19 features: "Y"
20 relations: "EDAM_data:0849 Sequence record"
21 ]
22
23 string: format [
24 information: "Output file format. Dependent on 'convert' command"
25 knowntype: "output format"
26 default: "png"
27 ]
28
29 endsection: input
30
31 section: advanced [
32 information: "Advanced section"
33 type: "page"
34 ]
35
36 integer: width [
37 information: "Width of image"
38 default: "1024"
39 ]
40
41 endsection: advanced
42
43 section: output [
44 information: "Output section"
45 type: "page"
46 ]
47
48 string: goutfile [
49 information: "Output file for non interactive displays"
50 knowntype: "output filename"
51 relations: "EDAM_data:2166 Sequence composition plot"
52 default: "gcgr"
53 ]
54
55 endsection: output