Mercurial > repos > ktnyt > gembassy
comparison GEMBASSY-1.0.3/acd/gdeltaenc.acd @ 2:8947fca5f715 draft default tip
Uploaded
| author | ktnyt |
|---|---|
| date | Fri, 26 Jun 2015 05:21:44 -0400 |
| parents | 84a17b3fad1f |
| children |
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| 1:84a17b3fad1f | 2:8947fca5f715 |
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| 1 application: gdeltaenc [ | |
| 2 documentation: "Calculates the codon usage bias related to translation | |
| 3 optimization (delta ENC)" | |
| 4 groups: "Nucleic:Codon Usage" | |
| 5 embassy: "gembassy" | |
| 6 relations: "EDAM_topic:0157 Sequence composition analysis" | |
| 7 relations: "EDAM_operation:0377 Sequence composition calculation | |
| 8 (nucleic acid)" | |
| 9 ] | |
| 10 | |
| 11 section: input [ | |
| 12 information: "Input section" | |
| 13 type: "page" | |
| 14 ] | |
| 15 | |
| 16 seqall: sequence [ | |
| 17 parameter: "Y" | |
| 18 type: "nucleotide" | |
| 19 features: "Y" | |
| 20 relations: "EDAM_data:0849 Sequence record" | |
| 21 ] | |
| 22 | |
| 23 endsection: input | |
| 24 | |
| 25 section: advanced [ | |
| 26 information: "Advanced section" | |
| 27 type: "page" | |
| 28 ] | |
| 29 | |
| 30 boolean: accid [ | |
| 31 information: "Include to use sequence accession ID as query" | |
| 32 default: "N" | |
| 33 ] | |
| 34 | |
| 35 endsection: advanced | |
| 36 | |
| 37 section: output [ | |
| 38 information: "Output section" | |
| 39 type: "page" | |
| 40 ] | |
| 41 | |
| 42 outfile: outfile [ | |
| 43 parameter: "Y" | |
| 44 information: "Program compseq output file" | |
| 45 knowntype: "compseq output" | |
| 46 relations: "EDAM_data:3086 Nucleic acid sequence composition" | |
| 47 ] | |
| 48 | |
| 49 endsection: output |