Mercurial > repos > ktnyt > gembassy
diff GEMBASSY-1.0.3/acd/gcgr.acd @ 0:8300eb051bea draft
Initial upload
author | ktnyt |
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date | Fri, 26 Jun 2015 05:19:29 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/GEMBASSY-1.0.3/acd/gcgr.acd Fri Jun 26 05:19:29 2015 -0400 @@ -0,0 +1,55 @@ +application: gcgr [ + documentation: "Creates a Chaos Game Representation of a given sequence" + groups: "Display" + embassy: "gembassy" + relations: "EDAM_topic:0092 Data visualisation" + relations: "EDAM_topic:0157 Sequence composition analysis" + relations: "EDAM_operation:0377 Sequence composition calculation + (nucleic acid)" +] + +section: input [ + information: "Input section" + type: "page" +] + + seqall: sequence [ + parameter: "Y" + type: "nucleotide" + features: "Y" + relations: "EDAM_data:0849 Sequence record" + ] + + string: format [ + information: "Output file format. Dependent on 'convert' command" + knowntype: "output format" + default: "png" + ] + +endsection: input + +section: advanced [ + information: "Advanced section" + type: "page" +] + + integer: width [ + information: "Width of image" + default: "1024" + ] + +endsection: advanced + +section: output [ + information: "Output section" + type: "page" +] + + string: goutfile [ + information: "Output file for non interactive displays" + knowntype: "output filename" + relations: "EDAM_data:2166 Sequence composition plot" + default: "gcgr" + ] + +endsection: output