diff GEMBASSY-1.0.3/src/gentrez.c @ 2:8947fca5f715 draft default tip

Uploaded
author ktnyt
date Fri, 26 Jun 2015 05:21:44 -0400
parents 84a17b3fad1f
children
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--- a/GEMBASSY-1.0.3/src/gentrez.c	Fri Jun 26 05:20:29 2015 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,108 +0,0 @@
-/******************************************************************************
-** @source gentrez
-**
-** Search NCBI Entrez in G-language Shell
-**
-** @author Copyright (C) 2012 Hidetoshi Itaya
-** @version 1.0.3
-** @modified 2012/1/20  Hidetoshi Itaya  Created!
-** @modified 2013/6/16  Revision 1
-** @modified 2015/2/7   Refactor
-** @@
-**
-** This program is free software; you can redistribute it and/or
-** modify it under the terms of the GNU General Public License
-** as published by the Free Software Foundation; either version 2
-** of the License, or (at your option) any later version.
-**
-** This program is distributed in the hope that it will be useful,
-** but WITHOUT ANY WARRANTY; without even the implied warranty of
-** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-** GNU General Public License for more details.
-**
-** You should have received a copy of the GNU General Public License
-** along with this program; if not, write to the Free Software
-** Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
-******************************************************************************/
-
-
-#include "emboss.h"
-#include "soapH.h"
-#include "GLANGSoapBinding.nsmap"
-#include "soapClient.c"
-#include "soapC.c"
-#include "../gsoap/stdsoap2.c"
-#include "glibs.h"
-
-
-
-
-/* @prog gentrez **************************************************************
-**
-** Search NCBI Entrez in G-language Shell
-**
-******************************************************************************/
-
-int main(int argc, char *argv[])
-{
-  embInitPV("gentrez", argc, argv, "GEMBASSY", "1.0.3");
-
-  struct soap soap;
-
-  AjPStr database = NULL;
-  AjPStr query    = NULL;
-
-  char *in0;
-  char *in1;
-  char *result;
-
-  AjPFile outf = NULL;
-
-  database = ajAcdGetString("database");
-  query    = ajAcdGetString("query");
-  outf     = ajAcdGetOutfile("outfile");
-
-  in0 = ajCharNewS(database);
-  in1 = ajCharNewS(query);
-
-  soap_init(&soap);
-
-  if(soap_call_ns1__entrez(
-                          &soap,
-			   NULL,
-			   NULL,
-			   in0,
-			   in1,
-			  &result
-			  ) == SOAP_OK)
-    {
-      if(result)
-        {
-          ajFmtPrintF(outf, "%s", result);
-        }
-      else
-        {
-          ajFmtPrintF(outf, "No results found.\n");
-        }
-    }
-  else
-    {
-      soap_print_fault(&soap, stderr);
-    }
-
-  soap_destroy(&soap);
-  soap_end(&soap);
-  soap_done(&soap);
-
-  ajFileClose(&outf);
-
-  AJFREE(in0);
-  AJFREE(in1);
-
-  ajStrDel(&database);
-  ajStrDel(&query);
-
-  embExit();
-
-  return 0;
-}