Mercurial > repos > kyost > atac_primer_tool
changeset 4:72571a30f17b draft
Add test for unique peak names.
| author | kyost |
|---|---|
| date | Wed, 02 May 2018 13:20:21 -0400 |
| parents | fbfe7b785ea7 |
| children | 3cd53127a838 |
| files | make_window_bed.R |
| diffstat | 1 files changed, 2 insertions(+), 0 deletions(-) [+] |
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--- a/make_window_bed.R Wed May 02 13:20:01 2018 -0400 +++ b/make_window_bed.R Wed May 02 13:20:21 2018 -0400 @@ -15,6 +15,8 @@ qPCR_table <- read.delim(qPCR_bed, header=FALSE, stringsAsFactors=FALSE) +qPCR_table[,4] <- make.unique(qPCR_table[,4], sep = "_") + make_windows_bed <- function(a, size) { #a is a bed file containing peaks of interest and coordinates #generates bed file with overlapping windows spanning each peak of specified size return_bed <- data.frame()