annotate src/compound-ref.html @ 1:7e3085fc60c1 draft default tip

master branch Updating
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date Wed, 30 Aug 2023 14:21:18 +0000
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1 <div class="tab-pane fade {{ ACTIVE_TAB_PLACEHOLDER }} in" id="tab-index-{{ TAB_INDEX_PLACEHOLDER }}">
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2 <div class="panel-group" id="accordion-{{ TAB_INDEX_PLACEHOLDER }}">
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3 <div class="panel panel-default">
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4 <div class="panel-heading panel-success">
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5 <h4 class="panel-title">
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6 <a data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step0-{{ TAB_INDEX_PLACEHOLDER }}">
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7 Spectrum Type <i id="step0sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
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8 </a>
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9 </h4>
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10 </div>
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11 <div id="step0-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse in">
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12 <div class="panel-body">
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13 <button class="btn btn-disabled" disabled="disabled"><i class="fa fa-plus-circle"></i> GC-MS spectrum</button>
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14 <button id="set_LC_MS_spectrum_button" class="btn btn-primary" onclick="ctx().addOneSpectrum(2);"><i class="fa fa-plus-circle"></i> LC-MS spectrum</button>
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15 <button id="set_LC_MSMS_spectrum_button" class="btn btn-primary" onclick="ctx().addOneSpectrum(5);"><i class="fa fa-plus-circle"></i> LC-MSMS spectrum</button>
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16 </div>
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17 </div>
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18 </div>
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19 <div id="add1spectrum-sampleData-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
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20 <div class="panel-heading panel-success">
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21 <h4 class="panel-title">
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22 <a id="linkActivateStep1-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step1-{{ TAB_INDEX_PLACEHOLDER }}">
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23 Sample Type <i id="step1sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
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24 </a>
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25 </h4>
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26 </div>
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27 <div id="step1-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
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28 <div class="panel-body">
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29 <div class="col-lg-12">
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30 <div class="col-lg-8">
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31 <div class="panel panel-default">
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32 <div class="panel-heading">
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33 <div class="form-group input-group has-error">
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34 <span class="input-group-addon">Sample Type</span>
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35 <select id="add1spectrum-sample-type-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-sampleForm is-mandatory">
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36 <option value="" selected="selected" disabled="disabled">choose in list…</option>
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37 <option value="compound-ref">Ref. Chemical Compound</option>
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38 </select>
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39 </div>
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40 </div>
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41 <div class="panel-body">
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42 <div id="add1spectrum-sample-type-compound-ref-{{ TAB_INDEX_PLACEHOLDER }}" class="add1spectrum-sample-type-panel" style="display:none;">
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43 <div class="form-group input-group has-error">
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44 <span class="input-group-addon">InChIKey</span>
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45 <input id="add1spectrum-sample-inchikey-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-mandatory" placeholder="e.g. RYYVLZVUVIJVGH-UHFFFAOYSA-N">
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46 <span class="input-group-btn">
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47 <button class="btn btn-default" type="button" onclick="ctx().pickChemicalCompound();">
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48 <i class="fa fa-search"></i>
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49 </button>
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50 </span>
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51 </div>
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52 <div class="form-group input-group has-warning">
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53 <span class="input-group-addon">concentration <small>(mmol/L)</small></span>
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54 <input id="add1spectrum-sample-concentration-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="42">
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55 </div>
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56 <div class="form-group input-group opt-ms has-warning" style="display: none;">
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57 <span class="input-group-addon">solvent</span>
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58 <select id="add1spectrum-sample-lcmsSolvent-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-sampleForm is-optional"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="none" class="">none</option><option value="H2O" class="">H2O</option><option value="3/5 in H2O + 0.1% AF/ ACN + 0.1% AF (50/50, V/V)" class="">3/5 in H2O + 0.1% AF/ ACN + 0.1% AF (50/50, V/V)</option><option value="ACN/H2O (1/1, V/V)" class="">ACN/H2O (1/1, v/v)</option><option value="CH3OH/H2O (1/1, V/V)" class="">CH3OH/H2O (1/1, v/v)</option><option value="H2O/ACN (40/60)" class="">H2O/ACN (40/60)</option><option value="H2O/ACN (95/5)" class="">H2O/ACN (95/5)</option><option value="H20+0.1% FORMIC ACID / ACN+0.1% FORMIC ACID (50/50, V/V)" class="">H20+0.1% Formic Acid / ACN+0.1% Formic Acid (50/50, V/V)</option></select>
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59 </div>
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60 <div class="form-group input-group has-warning">
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61 <span class="input-group-addon">InChI</span>
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62 <input id="add1spectrum-sample-inchi-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="e.g. InChI=1S/C8H10N4O2/c1-10-4-9-6-5(10)7(13)12(3)8(14)11(6)2/h4H,1-3H3">
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63 </div>
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64 <div class="form-group input-group has-warning">
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65 <span class="input-group-addon">Molecule common name</span>
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66 <input id="add1spectrum-sample-commonName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="pickChemicalCompound form-control add1spectrum add1spectrum-sampleForm is-optional" placeholder="e.g. Caffeine">
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67 </div>
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68 </div>
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69 <div id="add1spectrum-sample-type-rcc-added-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default add1spectrum-sample-type-panel" style="display:none;">
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70 <div class="panel-heading">
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71 <h3 class="panel-title">Reference compound added</h3>
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72 </div>
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73 <div class="panel-body" style="padding: 0px;">
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74 <div id="container_RCC_ADDED-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable"></div>
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75 </div>
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76 </div>
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77 </div>
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78 </div>
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79 </div>
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80 <div class="col-lg-4">
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81 <div id="sample-bonus-display-{{ TAB_INDEX_PLACEHOLDER }}"></div>
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82 &nbsp;
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83 </div>
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84 </div>
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85 <div class="col-lg-12">
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86 <div class="col-lg-8">
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87 <br>
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88 <button id="btnSwitch-gotoStep2-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(2);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button>
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89 </div>
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90 <div class="col-lg-4">&nbsp;</div>
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91 </div>
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92 </div>
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93 </div>
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94 </div>
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95 <div id="add1spectrum-chromatographyData-LC-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
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96 <div class="panel-heading panel-success">
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97 <h4 class="panel-title">
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98 <a id="linkActivateStep2-lc-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step2-lc-{{ TAB_INDEX_PLACEHOLDER }}">
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99 Liquid Chromatography <i id="step2-lc-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
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100 </a>
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101 </h4>
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102 </div>
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103 <div id="step2-lc-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
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104 <div class="panel-body">
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105 <div class="col-lg-12">
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106 <div class="col-lg-6">
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107 <div class="panel panel-default">
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108 <div class="panel-heading">
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109 <h3 class="panel-title">Chromatography Param.</h3>
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110 </div>
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111 <div class="panel-body">
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112 <div class="form-group input-group has-error">
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113 <span class="input-group-addon">Method</span>
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114 <select
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115 id="add1spectrum-chromatoLC-method-{{ TAB_INDEX_PLACEHOLDER }}"
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116 class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"
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117 ></select>
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118 </div>
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119 <div id="alertBoxSelectTemplate-{{ TAB_INDEX_PLACEHOLDER }}"></div>
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120 <div class="form-group input-group has-error">
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121 <span class="input-group-addon">Column constructor</span>
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122 <select id="add1spectrum-chromatoLC-colConstructor-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="Agilent">Agilent</option><option value="alltech">Alltech</option><option value="CIL cluzeau">Cil cluzeau</option><option value="Daicel">Daicel</option><option value="Hypersil">Hypersil</option><option value="Interchim">Interchim</option><option value="Macherey nagel">Macherey nagel</option><option value="Merck">Merck</option><option value="Phenomenex">Phenomenex</option><option value="Shiseido">Shiseido</option><option value="Supelco (sigma-aldrich)">Supelco (sigma-aldrich)</option><option value="Thermo">Thermo</option><option value="Vydac">Vydac</option><option value="Waters">Waters</option><option value="YMC">YMC</option><option value="other">Other</option></select>
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123 </div>
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124 <div class="form-group input-group ">
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125 <span class="input-group-addon">Column constructor (other)</span>
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126 <input id="add1spectrum-chromatoLC-colConstructorOther-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm" disabled="disabled" placeholder="e.g. HAL 9000">
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127 </div>
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128 <div class="form-group input-group has-warning">
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129 <span class="input-group-addon">Column name</span>
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130 <input id="add1spectrum-chromatoLC-colName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. UPLC HSS T3">
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131 </div>
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132 <div class="form-group input-group has-error">
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133 <span class="input-group-addon">Column length (mm)</span>
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134 <input id="add1spectrum-chromatoLC-colLength-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 150">
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135 </div>
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136 <div class="form-group input-group has-error">
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137 <span class="input-group-addon">Column diameter (mm)</span>
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138 <input id="add1spectrum-chromatoLC-colDiameter-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 2.1">
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139 </div>
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140 <div class="form-group input-group has-error">
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141 <span class="input-group-addon">Particule size (µm)</span>
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142 <input id="add1spectrum-chromatoLC-colParticuleSize-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory" placeholder="e.g. 1.8">
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143 </div>
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144 <div class="form-group input-group has-warning">
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145 <span class="input-group-addon">Column temperature (°C)</span>
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146 <input id="add1spectrum-chromatoLC-colTemperature-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 30">
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147 </div>
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148 <div class="form-group input-group has-error">
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149 <span class="input-group-addon">LC mode</span>
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150 <select id="add1spectrum-chromatoLC-LCMode-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory">
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151 <option value="" selected="selected" disabled="disabled">choose in list…</option>
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152 <option value="Gradient">Gradient</option>
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153 <option value="Isocratic">Isocratic</option>
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154 </select>
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155 </div>
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156 <div class="form-group input-group has-warning">
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157 <span class="input-group-addon">Separation flow rate (µL/min)</span>
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158 <input id="add1spectrum-chromatoLC-separationFlowRate-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 400">
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159 </div>
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160 <div class="form-group input-group has-error">
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161 <span class="input-group-addon">Separation solvent A</span>
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162 <select id="add1spectrum-chromatoLC-separationSolvA-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="5% ACN + 0.1% FA in H2O">5% ACN + 0.1% FA in H2O</option><option value="10% ACN + 0.1% FA in H2O">10% ACN + 0.1% FA in H2O</option><option value="10mM (NH4)2CO3 / ACN (20/80) (v/v)">10mM (NH4)2CO3 / ACN (20/80) (v/v)</option><option value="Acetonitrile">Acetonitrile</option><option value="Acetonitrile + 0.1% Formic Acid">Acetonitrile + 0.1% Formic Acid</option><option value="H2O + 0.1% Formic Acid">H2O + 0.1% Formic Acid</option><option value="H2O, ammonium carbonate 10 mM, pH10.5">H2O, ammonium carbonate 10 mM, pH10.5</option><option value="H2O, ammonium acetate 2.5 mM">H2O, ammonium acetate 2.5 mM</option><option value="H2O / CH3OH / CH3CO2H (95/5/0.1)">H2O / CH3OH / CH3CO2H (95/5/0.1)</option><option value="Methanol">Methanol</option><option value="Methanol / H2O (1/1)">Methanol / H2O (1/1)</option><option value="Methanol / H2O (1/1), 0.1% FA">Methanol / H2O (1/1), 0.1% FA</option><option value="Methanol / CH3CO2H (100/0.1)">Methanol / CH3CO2H (100/0.1)</option><option value="Methanol / ACN (60/40) ammonium acetate 2.5 mM">Methanol / ACN (60/40) ammonium acetate 2.5 mM</option></select>
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163 </div>
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164 <div class="form-group input-group has-warning">
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165 <span class="input-group-addon">pH solvent A (if acqueous solvant)</span>
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166 <input id="add1spectrum-chromatoLC-separationSolvApH-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 7.0">
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167 </div>
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168 <div class="form-group input-group has-error">
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169 <span class="input-group-addon">Separation solvent B</span>
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170 <select id="add1spectrum-chromatoLC-separationSolvB-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-chromatoLCForm is-mandatory"><option value="" selected="selected" disabled="disabled">choose in list…</option><option value="5% ACN + 0.1% FA in H2O">5% ACN + 0.1% FA in H2O</option><option value="10% ACN + 0.1% FA in H2O">10% ACN + 0.1% FA in H2O</option><option value="10mM (NH4)2CO3 / ACN (20/80) (v/v)">10mM (NH4)2CO3 / ACN (20/80) (v/v)</option><option value="Acetonitrile">Acetonitrile</option><option value="Acetonitrile + 0.1% Formic Acid">Acetonitrile + 0.1% Formic Acid</option><option value="H2O + 0.1% Formic Acid">H2O + 0.1% Formic Acid</option><option value="H2O, ammonium carbonate 10 mM, pH10.5">H2O, ammonium carbonate 10 mM, pH10.5</option><option value="H2O, ammonium acetate 2.5 mM">H2O, ammonium acetate 2.5 mM</option><option value="H2O / CH3OH / CH3CO2H (95/5/0.1)">H2O / CH3OH / CH3CO2H (95/5/0.1)</option><option value="Methanol">Methanol</option><option value="Methanol / H2O (1/1)">Methanol / H2O (1/1)</option><option value="Methanol / H2O (1/1), 0.1% FA">Methanol / H2O (1/1), 0.1% FA</option><option value="Methanol / CH3CO2H (100/0.1)">Methanol / CH3CO2H (100/0.1)</option><option value="Methanol / ACN (60/40) ammonium acetate 2.5 mM">Methanol / ACN (60/40) ammonium acetate 2.5 mM</option></select>
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171 </div>
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172 <div class="form-group input-group has-warning">
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173 <span class="input-group-addon">pH solvent B (if acqueous solvant)</span>
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174 <input id="add1spectrum-chromatoLC-separationSolvBApH-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-chromatoLCForm is-optional" placeholder="e.g. 7.0">
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175 </div>
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176 </div>
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177 </div>
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178 </div>
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179 <div class="col-lg-6">
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180 <div class="panel panel-default">
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181 <div class="panel-heading">
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182 <h3 class="panel-title">Separation flow gradient</h3>
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183 </div>
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184 <div class="panel-body" style="padding: 0px;">
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185 <div id="container_LC_SFG-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable"></div>
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186 </div>
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187 </div>
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188 </div>
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189 </div>
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190 <div class="col-lg-12">
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191 <div class="col-lg-8">
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192 <br>
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193 <button id="btnSwitch-gotoStep3-lc-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button>
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194 </div>
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195 <div class="col-lg-4">&nbsp;</div>
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196 </div>
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197 </div>
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198 </div>
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199 </div>
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200 <div id="add1spectrum-chromatographyData-GC-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
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201 <div class="panel-heading panel-success">
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202 <h4 class="panel-title">
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203 <a id="linkActivateStep2-gc-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step2-gc-{{ TAB_INDEX_PLACEHOLDER }}">
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204 Gaz Chromatography <i id="step2-gc-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
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205 </a>
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206 </h4>
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207 </div>
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208 <div id="step2-gc-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
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209 <div class="panel-body">
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210 <div class="col-lg-12">
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211 <div class="col-lg-6">
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212 i &lt;3 GC
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213 </div>
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214 <div class="col-lg-6">&nbsp;</div>
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215 </div>
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216 <div class="col-lg-12">
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217 <div class="col-lg-8">
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218 <br>
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219 <button id="btnSwitch-gotoStep3-gc-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button>
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220 </div>
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221 <div class="col-lg-4">&nbsp;</div>
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222 </div>
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223 </div>
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224 </div>
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225 </div>
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226 <div id="add1spectrum-analyserData-MS-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
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227 <div class="panel-heading panel-success">
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228 <h4 class="panel-title">
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229 <a id="linkActivateStep3-ms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step3-ms-{{ TAB_INDEX_PLACEHOLDER }}">
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230 MS Analyzer <i id="step3-ms-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
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231 </a>
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232 </h4>
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233 </div>
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234 <div id="step3-ms-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
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235 <div class="panel-body">
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236 <div class="col-lg-12">
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237 <div class="col-lg-6">
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238 <br>
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239 <div class="panel panel-default">
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240 <div class="panel-heading">
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241 <h3 class="panel-title">Analyzer</h3>
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242 </div>
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243 <div class="panel-body">
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244 <div class="form-group input-group has-error">
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245 <span class="input-group-addon">Instrument</span>
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246 <input id="add1spectrum-analyzer-ms-instrument-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory" placeholder="e.g. Q-TOF; LTQ - Orbitrap">
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247 </div>
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248 <div class="form-group input-group has-warning">
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249 <span class="input-group-addon">Model</span>
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250 <input id="add1spectrum-analyzer-ms-model-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. QToF micro (Micromass Waters); XL; Impact II; ...">
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251 </div>
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252 <div class="form-group">
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253 <div class="form-group input-group has-error">
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254 <span class="input-group-addon">Ion analyzer Type</span>
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255 <input id="add1spectrum-analyzer-ms-ionAnalyzerType-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory" placeholder="e.g. QTOF; QQQ; ...">
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256 </div>
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257 <p class="help-block">
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258 <small>
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259 Ion analyzer types are "B", "E", "FT" (include other types using FT like FTICR or Orbitrap), "IT", "Q", "TOF" (e.g.: "QTOF", "QQQ", "EB", "ITFT");
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260 for further informations please refer to <a target="_BLANK" href="https://github.com/MassBank/MassBank-web/blob/main/Documentation/MassBankRecordFormat.md#212-record_title">MassBank Record documentation</a>.
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261 </small>
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262 </p>
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263 </div>
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264 </div>
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265 </div>
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266 </div>
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267 <div class="col-lg-6">
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268 <br>
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269 <div class="panel panel-default">
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270 <div class="panel-heading">
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271 <h3 class="panel-title">Molecule Ionization</h3>
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272 </div>
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273 <div class="panel-body">
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274 <div class="form-group input-group has-error">
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275 <span class="input-group-addon">Ionization method <small>(POS/NEG)</small></span>
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276 <select id="add1spectrum-analyzserMS-ionizationMethod-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory one-or-more">
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277 <option value="" selected="selected" disabled="disabled">choose in list… (POS)</option>
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278 <option value="ACPI">ACPI</option><option value="APPI">APPI</option><option value="EI">EI</option><option value="ESI">ESI</option><option value="FAB">FAB</option><option value="MALDI">MALDI</option></select>
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279 <select id="add1spectrum-analyzserMS-ionizationMethod-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-mandatory one-or-more">
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280 <option value="" selected="selected" disabled="disabled">choose in list… (NEG)</option>
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281 <option value="ACPI">ACPI</option><option value="APPI">APPI</option><option value="EI">EI</option><option value="ESI">ESI</option><option value="FAB">FAB</option><option value="MALDI">MALDI</option></select>
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282 </div>
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283 <div class="form-group input-group has-warning">
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284 <span class="input-group-addon">Spray (needle) gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span>
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285 <input id="add1spectrum-analyzserMS-sprayGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (POS)">
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286 <input id="add1spectrum-analyzserMS-sprayGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 20 (NEG)">
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287 </div>
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288 <div class="form-group input-group has-warning">
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289 <span class="input-group-addon">Vaporizer gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span>
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290 <input id="add1spectrum-analyzserMS-vaporizerGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 10 (POS)">
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291 <input id="add1spectrum-analyzserMS-vaporizerGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 5 (NEG)">
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292 </div>
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293 <div class="form-group input-group has-warning">
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294 <span class="input-group-addon">Vaporizer temperature <br><small>(°C, POS/NEG)</small></span>
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295 <input id="add1spectrum-analyzserMS-vaporizerTemperature-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 330 (POS)">
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296 <input id="add1spectrum-analyzserMS-vaporizerTemperature-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 330 (NEG)">
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297 </div>
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298 <div class="form-group input-group has-warning">
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299 <span class="input-group-addon">Source gaz flow <br><small>(arbitrary in Xcalibur, POS/NEG)</small></span>
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300 <input id="add1spectrum-analyzserMS-sourceGazFlow-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (POS)">
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301 <input id="add1spectrum-analyzserMS-sourceGazFlow-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 40 (NEG)">
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302 </div>
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303 <div class="form-group input-group has-warning">
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304 <span class="input-group-addon">Ion transfer tube temperature <br> Transfer capillary temperature <small>(°C, POS/NEG)</small></span>
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305 <input id="add1spectrum-analyzserMS-ionTransferTubeTemperatureOrTransferCapillaryTemperature-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 350 (POS)">
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306 <input id="add1spectrum-analyzserMS-ionTransferTubeTemperatureOrTransferCapillaryTemperature-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 350 (NEG)">
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307 </div>
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308 <div class="form-group input-group has-warning">
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309 <span class="input-group-addon">High voltage (ESI) <br> Corona voltage (APCI) <small>(in kV, POS/NEG)</small></span>
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310 <input id="add1spectrum-analyzserMS-highVoltageOrCoronaVoltage-pos-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 3.5 (POS)">
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311 <input id="add1spectrum-analyzserMS-highVoltageOrCoronaVoltage-neg-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g. 2.8 (NEG)">
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312 </div>
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313 </div>
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314 </div>
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315 </div>
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316 <div class="col-lg-6 opt-msms">
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317 <br>
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318 <div class="panel panel-default">
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319 <div class="panel-heading">
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320 <h3 class="panel-title">Ion Storage / Ion Beam</h3>
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321 </div>
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322 <div class="panel-body">
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323 <div class="form-group input-group has-warning">
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324 <span class="input-group-addon">Type <small>(storage / beam)</small></span>
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325 <select id="add1spectrum-ionTrapBeam-type-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional one-or-more">
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326 <option value="" selected="selected" disabled="disabled">choose in list…</option>
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327 <option value="trap">Ion Trap</option>
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328 <option value="beam">Ion Beam</option>
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329 </select>
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330 </div>
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331 <p class="help-block">
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332 <small>
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333 Ion storage: Ion Trap (IT) and ICR.
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334 <br>Ion beam: Q or H collision Cell (QQQ, QQIT, QQ/TOF, Fusion).
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335 </small>
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336 </p>
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337 <div class="form-group input-group has-success">
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338 <span class="input-group-addon">Gas </span>
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339 <select id="add1spectrum-ionTrapBeam-ionGas-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional ">
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340 <option value="He">He</option>
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341 <option value="N2">N2</option>
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342 <option value="Ar">Ar</option>
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343 </select>
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344 </div>
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345 <div class="form-group input-group has-warning">
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346 <span class="input-group-addon">Gas pressure</span>
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347 <input id="add1spectrum-ionTrapBeam-ionGasPressureValue-{{ TAB_INDEX_PLACEHOLDER }}" type="text" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional ">
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348 <select id="add1spectrum-ionTrapBeam-ionGasPressureUnit-{{ TAB_INDEX_PLACEHOLDER }}" style="max-width: 50%;" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional ">
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349 <option value="" selected="selected" disabled="disabled">choose in list…</option>
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350 <option value="mbar">mbar</option>
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351 <option value="au">a.u.</option>
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352 </select>
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353 </div>
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354 <div class="form-group input-group add1spectrum-ionTrap has-warning">
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355 <span class="input-group-addon">Frequency Shift <small>(KHz)</small></span>
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356 <input id="add1spectrum-ionTrapBeam-ionFrequencyShift-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g.: ...">
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357 </div>
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358 <div class="form-group input-group add1spectrum-ionTrap has-warning">
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359 <span class="input-group-addon">Ion Number <small>(AGC or ICC)</small></span>
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360 <input id="add1spectrum-ionTrapBeam-ionNumber-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-analyzerMSForm is-optional" placeholder="e.g.: ...">
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361 </div>
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362 </div>
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363 </div>
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364 </div>
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365 </div>
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366 <div class="col-lg-12">
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367 <div class="col-lg-8">
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368 <br>
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369 <button id="btnSwitch-gotoStep4-ms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(4);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-down"></i> Next!</button>
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370 </div>
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371 <div class="col-lg-4">&nbsp;</div>
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372 </div>
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373 </div>
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374 </div>
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375 </div>
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376 <div id="add1spectrum-peaksData-MS-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
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377 <div class="panel-heading panel-success">
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378 <h4 class="panel-title">
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379 <a id="linkActivateStep4-ms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step4-ms-{{ TAB_INDEX_PLACEHOLDER }}">
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380 MS Peaks <i id="step4-ms-sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
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381 </a>
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382 </h4>
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383 </div>
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384 <div id="step4-ms-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
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385 <div class="panel-body">
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386 <div class="col-lg-12">
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387 <!--
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388 <div class="form-group input-group col-lg-3 has-success">
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389 <span class="input-group-addon">scan type</span>
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390 <select style="width: 150px;" id="add1spectrum-peaksMS-msLevel-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory">
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391 <option value="" disabled="disabled">choose in list…</option>
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392 <option class="enable-if-ms" value="ms" selected="selected">ms</option>
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393 <option class="enable-if-msms" value="ms2">ms2</option>
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394 </select>
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395 </div>
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396 -->
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397 <div class="form-group input-group col-lg-3 has-error">
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398 <span class="input-group-addon">polarity</span>
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399 <select style="width: 150px;" id="add1spectrum-peaksMS-polarity-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory">
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400 <option value="" selected="selected" disabled="disabled">choose in list…</option>
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401 <option value="positive">positive</option>
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402 <option value="negative">negative</option>
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403 </select>
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404 </div>
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405 <div class="form-group input-group col-lg-3 has-error">
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406 <span class="input-group-addon">resolution</span>
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407 <select style="width: 150px;" id="add1spectrum-peaksMS-resolution-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-mandatory">
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408 <option value="" disabled="disabled">choose in list…</option>
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409 <option value="low">low</option>
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410 <option selected="selected" value="high">high</option>
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411 </select>
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412 </div>
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413 <div class="form-group input-group col-lg-3 has-success">
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414 <span class="input-group-addon">curation</span>
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415 <select style="width: 150px;" id="add1spectrum-peaksMS-curation-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-optional">
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416 <option value="no_curation" selected="selected">no curation</option>
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417 <option value="peaks_RI_sup_1percent">Peaks RI &gt; 1%</option>
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418 <option value="top_50_peaks">Top 50 peaks</option>
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419 <option value="top_20_peaks">Top 20 peaks</option>
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420 <option value="top_10_peaks">Top 10 peaks</option>
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421 <option value="similar_chromatographic_profile">Similar chromatographic profile</option>
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422 </select>
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423 </div>
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424 </div>
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425 <br>
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426 <div class="col-lg-12 opt-msms">
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427 <hr><!--
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428 <div class="form-group input-group col-lg-4 has-warning">
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429 <span class="input-group-addon">precursor spectrum</span>
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430 <select style="width: 150px;" id="add1spectrum-peaksMS-msPrecursor-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm-peaklist-reset add1spectrum-peaksMSForm is-optional">
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431 <option value="" disabled="disabled">choose in list…</option>
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432 </select>
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433 </div> -->
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434
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435 <div class="form-group input-group col-lg-4 has-success">
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436 <span class="input-group-addon">Isolation mode <i class="fa fa-question-circle" title="IT / Q / TOF / ICR"></i></span>
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437 <select id="add1spectrum-peaksMS-isolationMode-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm is-optional add1spectrum-peaksMSForm-peaklist-reset">
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438 <option value="" disabled="disabled">choose in list…</option>
7e3085fc60c1 master branch Updating
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439 <option value="IT">IT</option>
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440 <option value="Q">Q</option>
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441 <option value="TOF">TOF</option>
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442 <option value="ICR">ICR</option>
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443 </select>
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444 </div>
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445 <div class="form-group input-group col-lg-4 has-warning">
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446 <span class="input-group-addon">Isolation window <i class="fa fa-question-circle" title="(+ / - value)"></i></span>
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447 <input id="add1spectrum-peaksMS-isolationWindow-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ...">
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448 </div>
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449 <div class="form-group input-group col-lg-4 has-warning">
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450 <span class="input-group-addon">qz isolation / activation <i class="fa fa-question-circle" title="if IT"></i> <small>(no unit)</small></span>
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451 <input id="add1spectrum-peaksMS-qzIsolation-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ...">
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452 </div>
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453 <div class="form-group input-group col-lg-4 has-warning">
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454 <span class="input-group-addon">Activation time <i class="fa fa-question-circle" title="if FT-ICR (SORI-CID) or IT"></i> <small>(ms)</small></span>
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455 <input id="add1spectrum-peaksMS-activationTime-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional add1spectrum-peaksMSForm-peaklist-reset" placeholder="e.g. ...">
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456 </div>
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457 <div class="form-group input-group col-lg-4 has-success">
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458 <span class="input-group-addon">Mode <i class="fa fa-question-circle" title="HCD / CID / ECD /ETD"></i></span>
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459 <select id="add1spectrum-peaksMS-mode-{{ TAB_INDEX_PLACEHOLDER }}" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist add1spectrum-peaksMSForm is-optional ">
7e3085fc60c1 master branch Updating
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diff changeset
460 <option value="" disabled="disabled">choose in list…</option>
7e3085fc60c1 master branch Updating
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461 <option value="HCD">HCD</option>
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462 <option value="CID">CID</option>
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463 <option value="ECD">ECD</option>
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464 <option value="ETD">ETD</option>
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465 </select>
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466 </div>
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467
7e3085fc60c1 master branch Updating
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468 <div class="form-group input-group col-lg-4 has-warning">
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469 <span class="input-group-addon">Frag. energy <i class="fa fa-question-circle" title="without unit"></i> </span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
470 <input id="add1spectrum-peaksMS-frag-nrj-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="disabled-if-ms form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional" placeholder="e.g. ...">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
471 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
472 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
473 <div class="col-lg-12">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
474 <div class="form-group input-group col-lg-4 has-warning">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
475 <span class="input-group-addon">Resolution FWHM <small>(resolution@mass)</small></span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
476 <input id="add1spectrum-analyzer-ms-resolutionFWHM-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-optional" placeholder="e.g. 6500@1000">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
477 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
478 <div class="form-group input-group col-lg-4 has-error">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
479 <span class="input-group-addon">m/z range <small>(ppm) from / to</small></span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
480 <input style="width: 100px;" id="add1spectrum-peaksMS-rangeFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="50" value="{{ DEFAULT_MIN_MZ }}">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
481 <input style="width: 100px;" id="add1spectrum-peaksMS-rangeTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="500" value="{{ DEFAULT_MAX_MZ }}">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
482 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
483 <div class="form-group input-group col-lg-4 has-error">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
484 <span class="input-group-addon">retention time (min) <small>from / to</small></span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
485 <input style="width: 100px;" id="add1spectrum-peaksMS-rtMinFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="0.9" value="{{ DEFAULT_MIN_RT }}">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
486 <input style="width: 100px;" id="add1spectrum-peaksMS-rtMinTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-mandatory" placeholder="1.4" value="{{ DEFAULT_MAX_RT }}">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
487 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
488 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
489 <div class="col-lg-12">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
490 <div class="form-group input-group col-lg-4 has-warning">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
491 <span class="input-group-addon">retention time (% solvant) <small>from / to</small></span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
492 <input style="width: 100px;" id="add1spectrum-peaksMS-rtSolvFrom-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-optional" placeholder="??">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
493 <input style="width: 100px;" id="add1spectrum-peaksMS-rtSolvTo-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum-peaksMSForm-peaklist add1spectrum is-optional" placeholder="??">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
494 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
495 <div class="col-lg-4">&nbsp;</div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
496 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
497 <div class="col-lg-12">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
498 <div class="col-lg-11">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
499 <br>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
500 <ul class="nav nav-tabs" style="margin-bottom: 15px;">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
501 <li class="active"><a id="link-spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}" href="#spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="tab"><i class="fa fa-table"></i> Peak List</a></li>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
502 <li class=""><a id="link-spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}" href="#spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().updateLCMSspectraViewer()" data-toggle="tab"><i class="fa fa-bar-chart-o"></i> Spectrum Preview</a></li>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
503 </ul>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
504 <div id="spectrum-signal-data-lcms-{{ TAB_INDEX_PLACEHOLDER }}" class="tab-content" style="">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
505 <div class="tab-pane fade active in" id="spectrum-peaklist-lcms-{{ TAB_INDEX_PLACEHOLDER }}">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
506 <div class="panel-body" style="padding: 0px;">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
507 <div id="container_MS_Peaks-{{ TAB_INDEX_PLACEHOLDER }}" class="handsontable col-lg-6" style="display: inline-block;"></div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
508
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
509 <div class="form-group input-group col-lg-3 has-warning hidden-if-ms">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
510 <span class="input-group-addon">Precursor ion <small>(M/Z)</small><i class="fa fa-question-circle" title="2 digits of precision."></i></span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
511 <input id="add1spectrum-peaksMS-msPrecursorIon-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-peaksMSForm-peaklist is-mandatory add1spectrum-peaksMSForm-peaklist-reset displayed-if-msms" placeholder="e.g. 123.45">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
512 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
513 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
514 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
515 <div class="tab-pane fade" id="spectrum-preview-lcms-{{ TAB_INDEX_PLACEHOLDER }}">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
516 <div id="containter-lcms-spectrum-preview-{{ TAB_INDEX_PLACEHOLDER }}" style="width: 80%;"></div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
517 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
518 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
519 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
520 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
521 <div class="col-lg-12">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
522 <div class="col-lg-8">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
523 <button class="btn btn-success" onclick="$('#add1spectrum-peaksMS-msPrecursorIon-{{ TAB_INDEX_PLACEHOLDER }}').change()">check</button>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
524 <button id="btnSwitch-gotoStep5-ms-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(5);" class="btn switchStep btn-primary"><i class="fa fa-arrow-circle-down"></i> Next!</button>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
525 <br>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
526 <br>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
527 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
528 <div class="col-lg-4">&nbsp;</div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
529 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
530 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
531 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
532 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
533 <div id="add1spectrum-otherData-{{ TAB_INDEX_PLACEHOLDER }}" class="panel panel-default" style="display: none;">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
534 <div class="panel-heading panel-success">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
535 <h4 class="panel-title">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
536 <a id="linkActivateStep5-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="collapse" data-parent="#accordion-{{ TAB_INDEX_PLACEHOLDER }}" href="#step5-{{ TAB_INDEX_PLACEHOLDER }}">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
537 Other <i id="step5sign-{{ TAB_INDEX_PLACEHOLDER }}" class="fa fa-question-circle"></i>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
538 </a>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
539 </h4>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
540 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
541 <div id="step5-{{ TAB_INDEX_PLACEHOLDER }}" class="panel-collapse collapse">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
542 <div class="panel-body">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
543 <div class="col-lg-12">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
544 <div class="col-lg-6">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
545 <div class="panel panel-default">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
546 <div class="panel-heading">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
547 <h3 class="panel-title">Ownership</h3>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
548 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
549 <div class="panel-body">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
550 <div class="form-group input-group has-error">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
551 <span class="input-group-addon">data author(s)</span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
552 <input id="add1spectrum-other-author-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-mandatory" placeholder="enter your lab. / plateforme name" value="">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
553 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
554 <div class="form-group input-group has-warning">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
555 <span class="input-group-addon">data validator(s)</span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
556 <input id="add1spectrum-other-validator-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="name of the personne who checked all data in this file">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
557 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
558 <div class="form-group input-group has-warning">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
559 <span class="input-group-addon">acquisition date</span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
560 <input id="add1spectrum-other-date-{{ TAB_INDEX_PLACEHOLDER }}" data-date-format="yyyy-mm-dd" type="text" class="form-control add1spectrum add1spectrum-otherForm datepicker is-optional" value="" placeholder="2022-11-04">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
561 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
562 <div class="form-group input-group has-warning">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
563 <span class="input-group-addon">data ownership</span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
564 <input id="add1spectrum-other-owner-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="enter your lab. / plateforme name &amp; sample provider;">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
565 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
566 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
567 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
568 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
569 <div class="col-lg-6">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
570 <div class="panel panel-default">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
571 <div class="panel-heading">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
572 <h3 class="panel-title">Raw File</h3>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
573 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
574 <div class="panel-body">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
575 <div class="form-group input-group has-warning">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
576 <span class="input-group-addon">raw file name</span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
577 <input id="add1spectrum-other-fileName-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="needed to retrieve file later">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
578 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
579 <div class="form-group input-group has-warning">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
580 <span class="input-group-addon">raw file size (Ko)</span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
581 <input id="add1spectrum-other-fileSize-{{ TAB_INDEX_PLACEHOLDER }}" type="text" class="form-control add1spectrum add1spectrum-otherForm is-optional" placeholder="optional, to check if the file is correct">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
582 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
583 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
584 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
585 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
586 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
587 <div class="col-lg-12">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
588 <div class="col-lg-8">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
589 <br>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
590 <button id="btnSwitch-gotoStep6-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(6);" class="btn btn-disabled switchStep" disabled=""><i class="fa fa-arrow-circle-right"></i> Validate this compound/mix!</button>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
591 <!-- <button onclick="enable_tab({{ TAB_INDEX_PLACEHOLDER }})" class="btn btn-success">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
592 <i class="fa fa-arrow-circle-right"></i>Modify this compound/mix!
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
593 </button> -->
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
594 <span id="import1SpectrumLoadingBare-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;"><img src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/img/ajax-loader.gif" title="please wait"></span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
595 <span id="import1SpectrumResults-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
596 <button id="btnSwitch-view-{{ TAB_INDEX_PLACEHOLDER }}" data-toggle="modal" data-target="#modalShowSpectra-{{ TAB_INDEX_PLACEHOLDER }}" class="btn btn-success"><i class="fa fa-eye"></i> View spectrum</button>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
597 <button id="btnSwitch-returntoStep3-{{ TAB_INDEX_PLACEHOLDER }}" onclick="ctx().switchToStep(3);" class="btn btn-primary"><i class="fa fa-arrow-circle-up"></i> Add new peaklist!</button>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
598 </span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
599 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
600 <div class="col-lg-4"><br><br><br></div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
601 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
602 <div class="col-lg-12">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
603 <div class="col-lg-8">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
604 <div id="alertBoxSubmitSpectrum-{{ TAB_INDEX_PLACEHOLDER }}" class="col-lg-6"></div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
605 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
606 <div class="col-lg-4">&nbsp;</div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
607 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
608 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
609 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
610 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
611 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
612 <script src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/dist/handsontable.full.min.js"></script>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
613 <link rel="stylesheet" media="screen" href="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/dist/handsontable.full.min.css">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
614 <link rel="stylesheet" media="screen" href="{{ PF_URL_PLACEHOLDER }}/webapp/resources/handsontable/bootstrap/handsontable.bootstrap.min.css">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
615 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
616 <div class="modal" id="modalPickCompound-{{ TAB_INDEX_PLACEHOLDER }}" tabindex="-1" role="dialog" aria-labelledby="modalPickCompoundLabel-{{ TAB_INDEX_PLACEHOLDER }}" aria-hidden="true">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
617 <div class="modal-dialog">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
618 <div class="modal-content">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
619 <div class="modal-header">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
620 <button type="button" class="close" data-dismiss="modal" aria-hidden="true">×</button>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
621 <h4 class="modal-title" id="modalPickCompoundLabel-{{ TAB_INDEX_PLACEHOLDER }}">Pick a compound</h4>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
622 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
623 <div class="modal-body">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
624 <div class="form-group input-group">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
625 <span class="input-group-addon">Compound Name</span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
626 <input id="add-one-cc-s1-value-{{ TAB_INDEX_PLACEHOLDER }}" class="form-control" placeholder="e.g. Caffeine" type="text">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
627 <span class="input-group-btn">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
628 <button class="btn btn-default" type="button" onclick="ctx().searchLocalCompound();">
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
629 <i class="fa fa-search"></i>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
630 </button>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
631 </span>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
632 </div>
7e3085fc60c1 master branch Updating
lain
parents:
diff changeset
633 <div id="load-step-1-{{ TAB_INDEX_PLACEHOLDER }}" style="display: none;">
7e3085fc60c1 master branch Updating
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parents:
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634 <img src="{{ PF_URL_PLACEHOLDER }}/webapp/resources/img/ajax-loader.gif" title="please wait">
7e3085fc60c1 master branch Updating
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parents:
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635 </div>
7e3085fc60c1 master branch Updating
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parents:
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636 <div id="ok-step-1-{{ TAB_INDEX_PLACEHOLDER }}" style="overflow: auto; max-height: 300px;"></div>
7e3085fc60c1 master branch Updating
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parents:
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637 </div>
7e3085fc60c1 master branch Updating
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parents:
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638 <div class="modal-footer">
7e3085fc60c1 master branch Updating
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parents:
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639 <button type="button" class="btn btn-danger" data-dismiss="modal" onclick="ctx().clearLine()">
7e3085fc60c1 master branch Updating
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parents:
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640 <i class="fa fa-eraser"></i> Clear
7e3085fc60c1 master branch Updating
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parents:
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641 </button>
7e3085fc60c1 master branch Updating
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parents:
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642 <button type="button" class="btn btn-default" data-dismiss="modal">Fermer</button>
7e3085fc60c1 master branch Updating
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parents:
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643 </div>
7e3085fc60c1 master branch Updating
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parents:
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644 </div>
7e3085fc60c1 master branch Updating
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parents:
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645 </div>
7e3085fc60c1 master branch Updating
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parents:
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646 </div>
7e3085fc60c1 master branch Updating
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parents:
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647 <div class="modal " id="modalShowSpectra-{{ TAB_INDEX_PLACEHOLDER }}" tabindex="-1" role="dialog" aria-labelledby="modalShowSpectraLabel-{{ TAB_INDEX_PLACEHOLDER }}" aria-hidden="true">
7e3085fc60c1 master branch Updating
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parents:
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648 <div class="modal-dialog">
7e3085fc60c1 master branch Updating
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parents:
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649 <div class="modal-content">
7e3085fc60c1 master branch Updating
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parents:
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650 <div class="modal-header">
7e3085fc60c1 master branch Updating
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parents:
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651 <button type="button" class="close" data-dismiss="modal" aria-hidden="true">×</button>
7e3085fc60c1 master branch Updating
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parents:
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652 <h4 class="modal-title" id="modalShowSpectraLabel-{{ TAB_INDEX_PLACEHOLDER }}">Modal title</h4>
7e3085fc60c1 master branch Updating
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parents:
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653 </div>
7e3085fc60c1 master branch Updating
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parents:
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654 <div class="modal-body">
7e3085fc60c1 master branch Updating
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parents:
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655 <div class="te"></div>
7e3085fc60c1 master branch Updating
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parents:
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656 </div>
7e3085fc60c1 master branch Updating
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parents:
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657 <div class="modal-footer">
7e3085fc60c1 master branch Updating
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parents:
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658 </div>
7e3085fc60c1 master branch Updating
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parents:
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659 </div>
7e3085fc60c1 master branch Updating
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parents:
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660 </div>
7e3085fc60c1 master branch Updating
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parents:
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661 </div>