Mercurial > repos > lain > xseekerpreparator

comparison test/test.sh @ 19:2937e72e5891 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
" master branch Updating"
author lain
date Tue, 18 Oct 2022 12:57:28 +0000
parents f4fc4a0f41e2
children
comparison
equal deleted inserted replaced
18:2c7e7fd1f740 19:2937e72e5891
3 currdir=`pwd` 3 currdir=`pwd`
4 cd `dirname $(readlink -f $0)` 4 cd `dirname $(readlink -f $0)`
5 5
6 ln -s ../data/ ./data 6 ln -s ../data/ ./data
7 7
8 ~/R/bin/Rscript $(realpath ../XSeekerPreparator.R) \ 8 # alias Rscript=~/R-versions/R-4.1.2/bin/Rscript
9
10 Rscript $(realpath ../XSeekerPreparator.R) \
9 -i $(realpath ../data/test.rdata) \ 11 -i $(realpath ../data/test.rdata) \
10 -m $(realpath ../data/models.R) \ 12 -m $(realpath ../data/models.R) \
11 -c $(realpath ../data/SERUM_v2019Jan17.tabular) \ 13 -c $(realpath ../data/SERUM_v2019Jan17.tabular) \
12 -o $(realpath ../test.sqlite) \ 14 -o $(realpath ../test.sqlite) \
15 $@ \
13 || true 16 || true
14 17
15 18
16 19
17 rm -rf "./data" 20 rm -rf "./data"