Mercurial > repos > lecorguille > camera_annotate
comparison README.rst @ 13:1c30ff90f3ae draft
planemo upload commit 301d42e88026afdac618f4ec56fc6cbe19e3e419
| author | lecorguille |
|---|---|
| date | Fri, 07 Apr 2017 07:42:18 -0400 |
| parents | 7da9252dd983 |
| children | 225cb8347572 |
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| 12:9c037181588e | 13:1c30ff90f3ae |
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| 1 | 1 |
| 2 Changelog/News | 2 Changelog/News |
| 3 -------------- | 3 -------------- |
| 4 | |
| 5 **Version 2.2.0 - 03/02/2017** | |
| 6 | |
| 7 - BUGFIX: the diffreport ids didn't convert the rt in minute as the other export | |
| 8 | |
| 9 - UPDATE: the settings (digits, convertion in minutes) of the identifiants will no longer modify the native one. Because we want to be conservative and because it can be dangerous for the data integrity during a futur merge of the table, we decide to put those customization in a new column namecustom within the variableMetadata. | |
| 10 | |
| 11 - IMPROVEMENT: add some sections within the form to separate the different parts of the process | |
| 12 | |
| 13 - IMPROVEMENT: add the possibility to use defined ruleset | |
| 14 | |
| 15 - IMPROVEMENT: add the possibility to set the MZ digit within the identifiants | |
| 16 | |
| 17 - IMPROVEMENT: CAMERA.annotate is now compatible with merged individual data from xcms.xcmsSet | |
| 18 | |
| 4 | 19 |
| 5 **Version 2.1.5 - 21/04/2016** | 20 **Version 2.1.5 - 21/04/2016** |
| 6 | 21 |
| 7 - UPGRADE: upgrate the CAMERA version from 1.22.0 to 1.26.0 | 22 - UPGRADE: upgrate the CAMERA version from 1.22.0 to 1.26.0 |
| 8 | 23 |
| 20 - IMPROVEMENT: when there are several conditions, the tool will generate individual datasets (tsv, pdf) instead of a zip file. The usual png (eic, boxplot) will from now be integrated in two pdf. | 35 - IMPROVEMENT: when there are several conditions, the tool will generate individual datasets (tsv, pdf) instead of a zip file. The usual png (eic, boxplot) will from now be integrated in two pdf. |
| 21 | 36 |
| 22 - UPDATE: refactoring of internal management of inputs/outputs | 37 - UPDATE: refactoring of internal management of inputs/outputs |
| 23 | 38 |
| 24 | 39 |
| 25 VERSION 2.1.0 - 09/10/2015** | 40 **VERSION 2.1.0 - 09/10/2015** |
| 26 | 41 |
| 27 - BUGFIX: There was a bug with the CAMERA.annotate (generating a bad dataMatrix (intensities which don't match with the metabolites)) | 42 - BUGFIX: There was a bug with the CAMERA.annotate (generating a bad dataMatrix (intensities which don't match with the metabolites)) |
| 28 | 43 |
| 29 | 44 |
| 30 VERSION 2.1.0 - 07/06/2015** | 45 **VERSION 2.1.0 - 07/06/2015** |
| 31 | 46 |
| 32 - IMPROVEMENT: new datatype/dataset formats (rdata.camera.positive, rdata.camera.negative, rdata.camera.quick ...) will facilitate the sequence of tools and so avoid incompatibility errors. | 47 - IMPROVEMENT: new datatype/dataset formats (rdata.camera.positive, rdata.camera.negative, rdata.camera.quick ...) will facilitate the sequence of tools and so avoid incompatibility errors. |
| 33 | 48 |
| 34 - IMPROVEMENT: parameter labels have changed to facilitate their reading. | 49 - IMPROVEMENT: parameter labels have changed to facilitate their reading. |
| 35 | 50 |
| 36 - UPDATE: merged with annotateDiffreport. Some parameters are dedicated to experiences with several conditions | 51 - UPDATE: merged with annotateDiffreport. Some parameters are dedicated to experiences with several conditions |
| 37 | |
| 38 | |
| 39 | |
| 40 Test Status | |
| 41 ----------- | |
| 42 | |
| 43 Planemo test using conda: passed | |
| 44 | |
| 45 Planemo test using source env.sh: passed | |
| 46 | |
| 47 Planemo shed_test : passed |