Mercurial > repos > lecorguille > ipo

diff planemo_test.sh @ 0:ac5f2936575b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 131562ad89c33a2f87754936ce3c8fe6899484c0
author lecorguille
date Thu, 03 Aug 2017 06:00:00 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/planemo_test.sh	Thu Aug 03 06:00:00 2017 -0400
@@ -0,0 +1,11 @@
+conda create -n r-ipo --use-local r-ipo r-batch
+. ~/miniconda2/bin/activate r-ipo
+planemo test --install_galaxy --galaxy_branch "dev" --update_test_data
+
+
+# -- Use of conda dependencies
+planemo conda_init --conda_prefix /tmp/mc
+planemo conda_install --conda_prefix /tmp/mc .
+planemo test --install_galaxy --conda_prefix /tmp/mc --conda_dependency_resolution
+
+planemo test --conda_auto_init --conda_auto_install --conda_dependency_resolution --conda_prefix /tmp/mc --galaxy_branch dev  > planemo.out 2>&1