Mercurial > repos > lecorguille > xcms_group
annotate README.rst @ 12:4c8507667cd6 draft
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit e351a27de90aaea30ec193b9663db895bcc7d7d2
author | lecorguille |
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date | Thu, 20 Jul 2017 04:14:50 -0400 |
parents | c81275aee959 |
children | 13558e8a4778 |
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3 | 1 |
2 Changelog/News | |
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4 | |
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c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
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changeset
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5 **Version 2.1.0 - 07/02/2017** |
c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
8
diff
changeset
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6 |
c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
8
diff
changeset
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7 - IMPROVEMENT: Add an option to export the peak list at this step without have to wait camara.annotate |
c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
8
diff
changeset
|
8 |
c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
8
diff
changeset
|
9 - IMPROVEMENT: xcms.group can deal with merged individual data from "xcms.xcmsSet Merger" |
c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
8
diff
changeset
|
10 |
c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
8
diff
changeset
|
11 - BUGFIX: the default value of "density" -> "Maximum number of groups to identify in a single m/z slice" which was of 5 have been changed to fix with the XMCS default values to 50 |
c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
8
diff
changeset
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12 |
8
5d80e7511dfb
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit ec6f0c17bb277ea34f898d96d12d3357220f73d4
lecorguille
parents:
4
diff
changeset
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13 **Version 2.0.6 - 06/07/2016** |
5d80e7511dfb
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit ec6f0c17bb277ea34f898d96d12d3357220f73d4
lecorguille
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4
diff
changeset
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14 |
5d80e7511dfb
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit ec6f0c17bb277ea34f898d96d12d3357220f73d4
lecorguille
parents:
4
diff
changeset
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15 - UPGRADE: upgrate the xcms version from 1.44.0 to 1.46.0 |
5d80e7511dfb
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit ec6f0c17bb277ea34f898d96d12d3357220f73d4
lecorguille
parents:
4
diff
changeset
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16 |
5d80e7511dfb
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit ec6f0c17bb277ea34f898d96d12d3357220f73d4
lecorguille
parents:
4
diff
changeset
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17 **Version 2.0.5 04/04/2016** |
4
2db1d1d0f131
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 83b80dcd96b379518c2e4ace992affc889d32ca6
lecorguille
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18 |
10
c81275aee959
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
lecorguille
parents:
8
diff
changeset
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19 - TEST: refactoring to pass planemo test using conda dependencies |
4
2db1d1d0f131
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 83b80dcd96b379518c2e4ace992affc889d32ca6
lecorguille
parents:
3
diff
changeset
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20 |
2db1d1d0f131
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 83b80dcd96b379518c2e4ace992affc889d32ca6
lecorguille
parents:
3
diff
changeset
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21 |
3 | 22 **Version 2.0.4 - 10/02/2016** |
23 | |
24 - BUGFIX: better management of errors. Datasets remained green although the process failed | |
25 | |
26 - UPDATE: refactoring of internal management of inputs/outputs | |
27 | |
28 - UPDATE: refactoring to feed the new report tool | |
29 | |
30 | |
31 **Version 2.0.2 - 02/06/2015** | |
32 | |
33 - IMPROVEMENT: new datatype/dataset formats (rdata.xcms.raw, rdata.xcms.group, rdata.xcms.retcor ...) will facilitate the sequence of tools and so avoid incompatibility errors. | |
34 | |
35 - IMPROVEMENT: parameter labels have changed to facilitate their reading. |