Mercurial > repos > lecorguille > xcms_group

comparison abims_xcms_group.xml @ 13:13558e8a4778 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 4897a06ef248e2e74e57a496dd68adbda3c828f1
author lecorguille
date Wed, 29 Nov 2017 09:46:03 -0500
parents 4c8507667cd6
children 833d2c821d9c
comparison
equal deleted inserted replaced
12:4c8507667cd6 13:13558e8a4778
1 <tool id="abims_xcms_group" name="xcms.group" version="2.1.0"> 1 <tool id="abims_xcms_group" name="xcms.group" version="2.1.1">
2 2
3 <description>Group peaks together across samples using overlapping m/z bins and calculation of smoothed peak distributions in chromatographic time.</description> 3 <description>Group peaks together across samples using overlapping m/z bins and calculation of smoothed peak distributions in chromatographic time.</description>
4 4
5 <macros> 5 <macros>
6 <import>macros.xml</import> 6 <import>macros.xml</import>
15 image '$image' 15 image '$image'
16 16
17 xsetRdataOutput '$xsetRData' 17 xsetRdataOutput '$xsetRData'
18 rplotspdf '$rplotsPdf' 18 rplotspdf '$rplotsPdf'
19 19
20 method $methods.method 20 method $methods.method
21 #if $methods.method == "density": 21 #if $methods.method == "density":
22 ## minsamp $methods.minsamp 22 ## minsamp $methods.minsamp
23 minfrac $methods.minfrac 23 minfrac $methods.minfrac
24 bw $methods.bw 24 bw $methods.bw
25 mzwid $methods.mzwid 25 mzwid $methods.mzwid
412 --------------------------------------------------- 412 ---------------------------------------------------
413 413
414 Changelog/News 414 Changelog/News
415 -------------- 415 --------------
416 416
417 **Version 2.1.1 - 29/11/2017**
418
419 - BUGFIX: To avoid issues with accented letter in the parentFile tag of the mzXML files, we changed a hidden mechanim to LC_ALL=C
420
417 **Version 2.1.0 - 07/02/2017** 421 **Version 2.1.0 - 07/02/2017**
418 422
419 - IMPROVEMENT: Add an option to export the peak list at this step without have to wait camara.annotate 423 - IMPROVEMENT: Add an option to export the peak list at this step without have to wait camara.annotate
420 424
421 - IMPROVEMENT: xcms.group can deal with merged individual data from "xcms.xcmsSet Merger" 425 - IMPROVEMENT: xcms.group can deal with merged individual data from "xcms.xcmsSet Merger"