Mercurial > repos > lecorguille > xcms_group

comparison abims_xcms_group.xml @ 12:4c8507667cd6 draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit e351a27de90aaea30ec193b9663db895bcc7d7d2
author lecorguille
date Thu, 20 Jul 2017 04:14:50 -0400
parents 9e45e1c404a4
children 13558e8a4778
comparison
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11:9e45e1c404a4 12:4c8507667cd6
51 <option value="density" selected="true">density</option> 51 <option value="density" selected="true">density</option>
52 <option value="mzClust" >mzClust</option> 52 <option value="mzClust" >mzClust</option>
53 <option value="nearest" >nearest</option> 53 <option value="nearest" >nearest</option>
54 </param> 54 </param>
55 <when value="density"> 55 <when value="density">
56 <param name="bw" type="integer" value="30" label="Bandwidth" help="[bw] bandwidth (standard deviation or half width at half maximum) of gaussian smoothing kernel to apply to the peak density chromatogram" /> 56 <param name="bw" type="float" value="30" label="Bandwidth" help="[bw] bandwidth (standard deviation or half width at half maximum) of gaussian smoothing kernel to apply to the peak density chromatogram" />
57 <param name="minfrac" type="float" value="0.5" label="Minimum fraction of samples necessary" help="[minfrac] in at least one of the sample groups for it to be a valid group" /> 57 <param name="minfrac" type="float" value="0.5" label="Minimum fraction of samples necessary" help="[minfrac] in at least one of the sample groups for it to be a valid group" />
58 <param name="mzwid" type="float" value="0.25" label="Width of overlapping m/z slices" help="[mzwid] to use for creating peak density chromatograms and grouping peaks across samples " /> 58 <param name="mzwid" type="float" value="0.25" label="Width of overlapping m/z slices" help="[mzwid] to use for creating peak density chromatograms and grouping peaks across samples " />
59 <!-- 59 <!--
60 <param name="minsamp" type="hidden" value="1" label="minsamp" help="minimum number of samples necessary in at least one of the sample groups for it to be a valid group " /> 60 <param name="minsamp" type="hidden" value="1" label="minsamp" help="minimum number of samples necessary in at least one of the sample groups for it to be a valid group " />
61 --> 61 -->