Mercurial > repos > lecorguille > xcms_group

comparison xcms_group.r @ 22:6842c495da6d draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 8ed93601e09e1db2fbaef5af29d58464b639f2a8
author lecorguille
date Tue, 09 Apr 2019 12:20:23 -0400
parents c8f8d598f562
children 761913919c21
comparison
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21:2d94a873d649 22:6842c495da6d
102 xset <- getxcmsSetObject(xdata) 102 xset <- getxcmsSetObject(xdata)
103 print(xset) 103 print(xset)
104 cat("\n\n") 104 cat("\n\n")
105 105
106 #saving R data in .Rdata file to save the variables used in the present tool 106 #saving R data in .Rdata file to save the variables used in the present tool
107 objects2save = c("xdata","zipfile","singlefile","md5sumList","sampleNamesList", "chromTIC", "chromBPI", "chromTIC_adjusted", "chromBPI_adjusted") 107 objects2save = c("xdata","zipfile","singlefile","md5sumList","sampleNamesList") #, "chromTIC", "chromBPI", "chromTIC_adjusted", "chromBPI_adjusted")
108 save(list=objects2save[objects2save %in% ls()], file="group.RData") 108 save(list=objects2save[objects2save %in% ls()], file="group.RData")
109 109
110 cat("\n\n") 110 cat("\n\n")
111 111
112 112