Mercurial > repos > lecorguille > xcms_merge
diff macros_xcms.xml @ 13:39797c768bba draft
"planemo upload for repository https://github.com/workflow4metabolomics/xcms commit f1caf2a3bf23cf319a75dd12c86402555dd02617"
author | workflow4metabolomics |
---|---|
date | Wed, 12 Feb 2020 08:29:39 -0500 |
parents | e3fccadf32a8 |
children | 5bd125a3f3b0 |
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--- a/macros_xcms.xml Mon Apr 29 06:25:47 2019 -0400 +++ b/macros_xcms.xml Wed Feb 12 08:29:39 2020 -0500 @@ -1,11 +1,11 @@ <?xml version="1.0"?> <macros> - <token name="@WRAPPER_VERSION@">3.4.4</token> + <token name="@TOOL_VERSION@">3.6.1</token> <xml name="requirements"> <requirements> - <requirement type="package" version="@WRAPPER_VERSION@">bioconductor-xcms</requirement> - <requirement type="package" version="1.1_4">r-batch</requirement> + <requirement type="package" version="@TOOL_VERSION@">bioconductor-xcms</requirement> + <requirement type="package" version="1.1_5">r-batch</requirement> <requirement type="package" version="1.1_2">r-rcolorbrewer</requirement> <requirement type="package" version="6.0">unzip</requirement> <yield /> @@ -69,11 +69,11 @@ </section> </xml> - <xml name="test_file_load_single_ko15"> + <xml name="test_file_load_single_file" token_filename=""> <section name="file_load_section"> <conditional name="file_load_conditional"> <param name="file_load_select" value="yes" /> - <param name="input" value="ko15.CDF" ftype="netcdf" /> + <param name="input" value="@FILENAME@.CDF" ftype="netcdf" /> </conditional> </section> </xml> @@ -178,7 +178,7 @@ </token> <xml name="input_centwave"> - <param argument="ppm" type="integer" value="25" label="Max tolerated ppm m/z deviation in consecutive scans in ppm" help="for the initial ROI definition." /> + <param argument="ppm" type="float" value="25" label="Max tolerated ppm m/z deviation in consecutive scans in ppm" help="for the initial ROI definition." /> <param argument="peakwidth" type="text" value="20,50" label="Min,Max peak width in seconds" help="with the expected approximate peak width in chromatographic space."> <expand macro="input_validator_range_float"/> </param> @@ -246,6 +246,17 @@ </token> + <token name="@HELP_XCMS_NEWVERSION_3440@"> +**Version 3.4.4.0 - 08/02/2019** + +- UPGRADE: upgrade the xcms version from 3.0.0 to 3.4.4 (see XCMS News_) + </token> + <token name="@HELP_XCMS_NEWVERSION_3610@"> +**Version 3.6.1+galaxy* - 03/09/2019** + +- UPGRADE: upgrade the xcms version from 3.4.4 to 3.6.1 (see XCMS News_) + </token> + <xml name="citation"> <citations> <citation type="doi">10.1021/ac051437y</citation>