Mercurial > repos > lecorguille > xcms_retcor
diff README.rst @ 10:8828cba9aedd draft
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 9f72e947d9c241d11221cad561f3525d27231857
author | lecorguille |
---|---|
date | Tue, 18 Sep 2018 16:12:29 -0400 |
parents | e4e0254a3c0a |
children | 950b97b679c6 |
line wrap: on
line diff
--- a/README.rst Wed Nov 29 09:46:41 2017 -0500 +++ b/README.rst Tue Sep 18 16:12:29 2018 -0400 @@ -2,26 +2,42 @@ Changelog/News -------------- +**Version 3.0.0.0 - 08/03/2018** + +- UPGRADE: upgrade the xcms version from 1.46.0 to 3.0.0. So refactoring of a lot of underlying codes and methods. Some parameters may have been renamed. + +- NEW: a bunch of new options: Obiwarp.(centerSample, response, distFun, gapInit, gapExtend, factorDiag, factorGap, localAlignment, initPenalty) + +- IMPROVEMENT: the advanced options are now in sections. It will allow you to access to all the parameters and to know their default values. + +- CHANGE: removing of the TIC and BPC plots. You can new use the dedicated tool "xcms plot chromatogram" + + **Version 2.1.1 - 29/11/2017** - BUGFIX: To avoid issues with accented letter in the parentFile tag of the mzXML files, we changed a hidden mechanim to LC_ALL=C + **Version 2.1.0 - 03/02/2017** - IMPROVEMENT: xcms.retcor can deal with merged individual data + **Version 2.0.8 - 22/12/2016** - BUGFIX: when having only one group (i.e. one folder of raw data) the BPC and TIC pdf files do not contain any graph + **Version 2.0.7 - 06/07/2016** - UPGRADE: upgrate the xcms version from 1.44.0 to 1.46.0 + **Version 2.0.6 - 04/04/2016** - TEST: refactoring to pass planemo test using conda dependencies + **Version 2.0.5 - 10/02/2016** - BUGFIX: better management of errors. Datasets remained green although the process failed