Mercurial > repos > lecorguille > xcms_xcmsset

comparison macros_xcms.xml @ 30:14b1c52fae62 draft

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"planemo upload for repository https://github.com/workflow4metabolomics/xcms commit f1caf2a3bf23cf319a75dd12c86402555dd02617"
author workflow4metabolomics
date Wed, 12 Feb 2020 08:30:58 -0500
parents 793f87231d49
children eb15a3841da4
comparison
equal deleted inserted replaced
29:793f87231d49 30:14b1c52fae62
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 3
4 <token name="@WRAPPER_VERSION@">3.4.4</token> 4 <token name="@TOOL_VERSION@">3.6.1</token>
5 <xml name="requirements"> 5 <xml name="requirements">
6 <requirements> 6 <requirements>
7 <requirement type="package" version="@WRAPPER_VERSION@">bioconductor-xcms</requirement> 7 <requirement type="package" version="@TOOL_VERSION@">bioconductor-xcms</requirement>
8 <requirement type="package" version="1.1_4">r-batch</requirement> 8 <requirement type="package" version="1.1_5">r-batch</requirement>
9 <requirement type="package" version="1.1_2">r-rcolorbrewer</requirement> 9 <requirement type="package" version="1.1_2">r-rcolorbrewer</requirement>
10 <requirement type="package" version="6.0">unzip</requirement> 10 <requirement type="package" version="6.0">unzip</requirement>
11 <yield /> 11 <yield />
12 </requirements> 12 </requirements>
13 </xml> 13 </xml>
67 <param name="input" value="wt15.CDF,ko16.CDF,ko15.CDF,wt16.CDF" ftype="netcdf" /> 67 <param name="input" value="wt15.CDF,ko16.CDF,ko15.CDF,wt16.CDF" ftype="netcdf" />
68 </conditional> 68 </conditional>
69 </section> 69 </section>
70 </xml> 70 </xml>
71 71
72 <xml name="test_file_load_single_ko15"> 72 <xml name="test_file_load_single_file" token_filename="">
73 <section name="file_load_section"> 73 <section name="file_load_section">
74 <conditional name="file_load_conditional"> 74 <conditional name="file_load_conditional">
75 <param name="file_load_select" value="yes" /> 75 <param name="file_load_select" value="yes" />
76 <param name="input" value="ko15.CDF" ftype="netcdf" /> 76 <param name="input" value="@FILENAME@.CDF" ftype="netcdf" />
77 </conditional> 77 </conditional>
78 </section> 78 </section>
79 </xml> 79 </xml>
80 80
81 <!-- PEAKLIST --> 81 <!-- PEAKLIST -->
244 .. _manual: http://www.bioconductor.org/packages/release/bioc/manuals/xcms/man/xcms.pdf 244 .. _manual: http://www.bioconductor.org/packages/release/bioc/manuals/xcms/man/xcms.pdf
245 .. _example: https://bioconductor.org/packages/release/bioc/vignettes/xcms/inst/doc/xcms.html 245 .. _example: https://bioconductor.org/packages/release/bioc/vignettes/xcms/inst/doc/xcms.html
246 246
247 </token> 247 </token>
248 248
249 <token name="@HELP_XCMS_NEWVERSION_3440@">
250 **Version 3.4.4.0 - 08/02/2019**
251
252 - UPGRADE: upgrade the xcms version from 3.0.0 to 3.4.4 (see XCMS News_)
253 </token>
254 <token name="@HELP_XCMS_NEWVERSION_3610@">
255 **Version 3.6.1+galaxy* - 03/09/2019**
256
257 - UPGRADE: upgrade the xcms version from 3.4.4 to 3.6.1 (see XCMS News_)
258 </token>
259
249 <xml name="citation"> 260 <xml name="citation">
250 <citations> 261 <citations>
251 <citation type="doi">10.1021/ac051437y</citation> 262 <citation type="doi">10.1021/ac051437y</citation>
252 <expand macro="citation_w4m"/> 263 <expand macro="citation_w4m"/>
253 </citations> 264 </citations>