Mercurial > repos > lecorguille > xcms_xcmsset

comparison job_conf.xml.sample @ 12:15646e937936 draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
author lecorguille
date Fri, 07 Apr 2017 07:35:01 -0400
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children c934dd5c49a9
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11:91311aa08cdc 12:15646e937936
1 <?xml version="1.0"?>
2 <!-- A sample job config that explicitly configures job running the way it is configured by default (if there is no explicit config). -->
3 <job_conf>
4 <plugins>
5 <plugin id="local" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/>
6 <plugin id="sge" load="galaxy.jobs.runners.drmaa:DRMAAJobRunner" type="runner"/>
7 <plugin id="dynamic" type="runner" >
8 <param id="rules_module">galaxy.jobs.rules</param>
9 </plugin>
10 </plugins>
11 <handlers>
12 <handler id="main"/>
13 </handlers>
14 <destinations default="sge_default">
15 <destination id="local" runner="local"/>
16 <destination id="sge_default" runner="sge">
17 <param id="nativeSpecification">-V -w n -q galaxy.q</param>
18 </destination>
19
20 <destination id="thread1-men_free10" runner="sge">
21 <param id="nativeSpecification">-V -w n -q galaxy.q -pe thread 1 -R y -l mem_free=10G </param>
22 </destination>
23 <destination id="thread4-men_free10" runner="sge">
24 <param id="nativeSpecification">-V -w n -q galaxy.q -pe thread 4 -R y -l mem_free=10G </param>
25 </destination>
26
27 <destination id="python_destination_input_type" runner="dynamic">
28 <param id="type">python</param>
29 <param id="function">input_type</param>
30 </destination>
31 </destinations>
32 <tools>
33 <tool destination="python_destination_input_type" id="abims_xcms_xcmsSet" />
34 <tool destination="local" id="upload1"/>
35 </tools>
36 </job_conf>