Mercurial > repos > lecorguille > xcms_xcmsset

comparison xcms_xcmsSet.r @ 24:9a0ca3f3a847 draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 8ed93601e09e1db2fbaef5af29d58464b639f2a8
author lecorguille
date Tue, 09 Apr 2019 12:12:48 -0400
parents 87df3692c68d
children 9eebe9690ced
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23:5c62dfdb64f4 24:9a0ca3f3a847
122 xset <- getxcmsSetObject(xdata) 122 xset <- getxcmsSetObject(xdata)
123 print(xset) 123 print(xset)
124 cat("\n\n") 124 cat("\n\n")
125 125
126 #saving R data in .Rdata file to save the variables used in the present tool 126 #saving R data in .Rdata file to save the variables used in the present tool
127 objects2save <- c("xdata", "zipfile", "singlefile", "md5sumList", "sampleNamesList", "chromTIC", "chromBPI") 127 objects2save <- c("xdata", "zipfile", "singlefile", "md5sumList", "sampleNamesList") #, "chromTIC", "chromBPI")
128 save(list=objects2save[objects2save %in% ls()], file="xcmsSet.RData") 128 save(list=objects2save[objects2save %in% ls()], file="xcmsSet.RData")
129 129
130 130
131 cat("\tDONE\n") 131 cat("\tDONE\n")