Mercurial > repos > lecorguille > xcms_xcmsset
comparison abims_xcms_xcmsSet.xml @ 17:ea974024a6c6 draft
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 8dfca81480bcbfb5b164ee736b2e2cad324ad8a1-dirty
author | lecorguille |
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date | Tue, 02 Oct 2018 09:17:50 -0400 |
parents | b62808a2a008 |
children | 87df3692c68d |
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16:d8c59fb7c821 | 17:ea974024a6c6 |
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143 <expand macro="input_centwave"/> | 143 <expand macro="input_centwave"/> |
144 <section name="CentWaveAdv" title="Advanced Options" expanded="False"> | 144 <section name="CentWaveAdv" title="Advanced Options" expanded="False"> |
145 <expand macro="input_centwaveAdv"/> | 145 <expand macro="input_centwaveAdv"/> |
146 </section> | 146 </section> |
147 <section name="CentWaveAdvROI" title="List of regions-of-interest (ROI)" expanded="True"> | 147 <section name="CentWaveAdvROI" title="List of regions-of-interest (ROI)" expanded="True"> |
148 <expand macro="input_centwaveAdvROI" optional="false" /> | 148 <expand macro="input_centwaveAdvROI" optional="true" /> |
149 <param argument="snthreshIsoROIs" type="float" value="6.25" label="Signal to noise ratio cutoff" help="used in the second centWave run to identify peaks for predicted isotope ROIs." /> | 149 <param argument="snthreshIsoROIs" type="float" value="6.25" label="Signal to noise ratio cutoff" help="used in the second centWave run to identify peaks for predicted isotope ROIs." /> |
150 <param argument="maxCharge" type="integer" value="3" label="Maximal isotope charge" help="Isotopes will be defined for charges ‘1:maxCharge’." /> | 150 <param argument="maxCharge" type="integer" value="3" label="Maximal isotope charge" help="Isotopes will be defined for charges ‘1:maxCharge’." /> |
151 <param argument="maxIso" type="integer" value="5" label="Number of isotope peaks that should be predicted for each peak identified in the first centWave run" /> | 151 <param argument="maxIso" type="integer" value="5" label="Number of isotope peaks that should be predicted for each peak identified in the first centWave run" /> |
152 <param argument="mzIntervalExtension" type="boolean" checked="true" truevalue="TRUE" falsevalue="FALSE" label="Is the mz range for the predicted isotope ROIs should be extended to increase detection of low intensity peaks" /> | 152 <param argument="mzIntervalExtension" type="boolean" checked="true" truevalue="TRUE" falsevalue="FALSE" label="Is the mz range for the predicted isotope ROIs should be extended to increase detection of low intensity peaks" /> |
153 <param argument="polarity" type="select" label="Polarity of the data"> | 153 <param argument="polarity" type="select" label="Polarity of the data"> |