Mercurial > repos > lecorguille > xcms_xcmsset

diff planemo_test.sh @ 8:53923784176c draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 960f403303e1691bdd6137c46895feb333b36a82
author lecorguille
date Mon, 04 Jul 2016 08:45:48 -0400
parents 451ff602a957
children
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--- a/planemo_test.sh	Mon Apr 25 11:14:02 2016 -0400
+++ b/planemo_test.sh	Mon Jul 04 08:45:48 2016 -0400
@@ -1,13 +1,11 @@
 # Example of planemo command to launch test
 
-# Note: --galaxy_branch "dev" is set to deal with zip file
-
 
 # -- Use of installed package environments
 # after having installing package on a local galaxy instance
 source /w/galaxy/dev/shed_tools_tool_dependency_dir/R/3.1.2/iuc/package_r_3_1_2/1ca39eb16186/env.sh
 source /w/galaxy/dev/shed_tools_tool_dependency_dir/bioconductor-xcms/1.44.0/lecorguille/package_bioconductor_xcms_1_44_0/0c38f7d43e08/env.sh
-planemo test --install_galaxy --galaxy_branch "dev"
+planemo test --install_galaxy
 
 #All 2 test(s) executed passed.
 #abims_xcms_xcmsSet[0]: passed
@@ -17,7 +15,7 @@
 # -- Use of conda dependencies
 planemo conda_init --conda_prefix /tmp/mc
 planemo conda_install --conda_prefix /tmp/mc . 
-planemo test --install_galaxy --conda_prefix /tmp/mc --conda_dependency_resolution --galaxy_branch "dev"
+planemo test --install_galaxy --conda_prefix /tmp/mc --conda_dependency_resolution
 
 #All 2 test(s) executed passed.
 #abims_xcms_xcmsSet[0]: passed
@@ -25,7 +23,7 @@
 
 
 # -- Use of shed_test
-planemo shed_test --install_galaxy  -t testtoolshed --galaxy_branch ="dev"
+planemo shed_test --install_galaxy  -t testtoolshed
 
 #All 2 test(s) executed passed.
 #testtoolshed.g2.bx.psu.edu/repos/lecorguille/xcms_group/abims_xcms_xcmsset/2.0.8[0]: passed