Mercurial > repos > lgueguen > sartools
view test-data/SARTools_edgeR_KOvsWT.complete.txt @ 3:de6d0b7c17af draft
release 1.6.3
author | lgueguen |
---|---|
date | Mon, 01 Oct 2018 05:07:56 -0400 |
parents | 581d217c7337 |
children |
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Id WT1 WT2 KO1 KO2 norm.WT1 norm.WT2 norm.KO1 norm.KO2 baseMean WT KO FC log2FoldChange pvalue padj tagwise.dispersion trended.dispersion feat0001 2728 1636 668 2378 1477 1291 3408 3446 2405.56 1384 3427 2.475 1.307 7.79599543765362e-26 1.05831303253472e-24 0.0066 0.0067 feat0002 3169 1892 376 1228 1716 1493 1918 1780 1726.7 1604 1849 1.147 0.198 0.130545989349202 0.170384470102199 0.0071 0.0075 feat0003 2784 1626 622 2117 1508 1283 3173 3068 2257.94 1396 3120 2.231 1.158 1.28625215680723e-19 1.14197945395106e-18 0.007 0.0068 feat0004 6311 4283 374 1470 3418 3379 1908 2130 2708.84 3398 2019 0.598 -0.742 6.38828918161185e-10 2.62901399067368e-09 0.006 0.0066 feat0005 12769 9132 718 3199 6915 7205 3663 4636 5604.8 7060 4150 0.591 -0.758 7.60645615828879e-09 2.76804019849896e-08 0.0078 0.007 feat0006 3953 2867 666 2579 2141 2262 3398 3738 2884.5 2202 3568 1.627 0.702 2.38863904781785e-09 9.24653217780584e-09 0.006 0.0066 feat0007 4070 2498 310 1039 2204 1971 1581 1506 1815.57 2088 1544 0.737 -0.441 0.000570823894492269 0.00112725654976982 0.0067 0.0073 feat0008 2750 2026 257 924 1489 1598 1311 1339 1434.49 1544 1325 0.86 -0.218 0.0958207230159633 0.128802610948291 0.0069 0.0083 feat0009 2044 1286 118 400 1107 1015 602 580 825.82 1061 591 0.555 -0.85 1.85178214020667e-07 5.76552912929317e-07 0.0099 0.0121 feat0010 3118 2361 511 1885 1689 1863 2607 2732 2222.52 1776 2670 1.507 0.592 1.02538994188499e-06 2.93416438406299e-06 0.0062 0.0068 feat0011 9296 4990 501 1705 5034 3937 2556 2471 3499.55 4486 2514 0.559 -0.838 8.82828539823182e-10 3.57946026212712e-09 0.0082 0.0066 feat0012 2933 2233 291 1158 1588 1762 1485 1678 1628.24 1675 1582 0.952 -0.071 0.58779948131871 0.640891567145058 0.0072 0.0077 feat0013 1663 1269 149 582 901 1001 760 843 876.35 951 802 0.851 -0.233 0.142926841736404 0.184305888476753 0.01 0.0116 feat0014 4406 2749 180 589 2386 2169 918 854 1581.73 2278 886 0.386 -1.373 4.23989480255885e-24 5.14936842051231e-23 0.0069 0.0078 feat0015 1703 1065 121 457 922 840 617 662 760.53 881 640 0.73 -0.454 0.0062313222294616 0.0104073416618448 0.0106 0.0128 feat0016 5355 4114 577 2218 2900 3246 2944 3214 3075.98 3073 3079 1.006 0.008 0.944853812345459 0.954238888593029 0.0064 0.0065 feat0017 14929 9447 739 2554 8085 7454 3770 3701 5752.48 7770 3736 0.48 -1.057 1.69770028833938e-19 1.4972511966452e-18 0.006 0.007 feat0018 3169 2279 444 1522 1716 1798 2265 2206 1996.28 1757 2236 1.271 0.346 0.00379338905209705 0.00657868103541138 0.006 0.0071 feat0019 5456 4062 445 1567 2955 3205 2270 2271 2675.19 3080 2270 0.737 -0.439 0.000218387882478178 0.000458626083715393 0.006 0.0066 feat0020 9338 6881 650 2420 5057 5429 3316 3507 4327.31 5243 3412 0.652 -0.617 6.87264841393329e-08 2.25451208795214e-07 0.0057 0.0067 feat0021 7675 6038 961 3697 4157 4764 4903 5358 4795.19 4460 5130 1.153 0.205 0.0888402705782257 0.12037546456307 0.0066 0.0068 feat0022 4253 2845 326 1495 2303 2245 1663 2167 2094.41 2274 1915 0.853 -0.23 0.0932231524996643 0.125714558083545 0.0081 0.0069 feat0023 9504 7828 494 1892 5147 6176 2520 2742 4146.32 5662 2631 0.466 -1.1 7.5045755019466e-18 5.85283314882208e-17 0.0071 0.0067 feat0024 3039 2655 268 1079 1646 2095 1367 1564 1667.87 1870 1466 0.79 -0.341 0.0225952216735988 0.0343418013781962 0.0095 0.0076 feat0025 3703 2787 477 1955 2005 2199 2433 2833 2367.74 2102 2633 1.261 0.335 0.00785544754854683 0.0129325507551097 0.0069 0.0067 feat0026 2169 1719 359 1314 1175 1356 1831 1904 1566.66 1266 1868 1.48 0.566 1.94447531192018e-05 4.72603150208525e-05 0.0073 0.0079 feat0027 6611 4630 853 3233 3580 3653 4352 4685 4067.56 3616 4518 1.252 0.325 0.00331405742323332 0.00581971894079935 0.0054 0.0066 feat0028 10881 8152 1620 6008 5893 6432 8265 8707 7324 6162 8486 1.378 0.463 9.68500985305593e-05 0.00021411978141208 0.0065 0.0074 feat0029 24362 18378 5975 17707 13194 14500 30482 25661 20959.17 13847 28072 2.026 1.019 2.88687014209753e-13 1.59368854825717e-12 0.0091 0.0089 feat0030 12087 9876 2455 9159 6546 7792 12524 13273 10033.9 7169 12898 1.8 0.848 1.14922252740989e-10 5.08740412106047e-10 0.008 0.0079 feat0031 2403 1939 687 2591 1301 1530 3505 3755 2522.73 1416 3630 2.572 1.363 9.50636450041952e-27 1.39013105883892e-25 0.0069 0.0067 feat0032 6349 5345 1126 4425 3438 4217 5744 6413 4953.16 3828 6078 1.592 0.671 3.25843225792036e-07 9.84086128008976e-07 0.0079 0.0068 feat0033 6894 4943 1636 5734 3734 3900 8346 8310 6072.37 3817 8328 2.182 1.126 2.41245967268691e-22 2.61816053154494e-21 0.006 0.0071 feat0034 7966 5390 1522 6214 4314 4253 7765 9005 6334.18 4284 8385 1.962 0.972 3.29319012042412e-15 2.10758868929798e-14 0.0069 0.0072 feat0035 4553 2926 415 1661 2466 2309 2117 2407 2324.65 2388 2262 0.954 -0.069 0.576324316722394 0.630020604579723 0.0064 0.0068 feat0036 3536 2344 593 2433 1915 1849 3025 3526 2578.88 1882 3276 1.75 0.807 4.53683717266055e-11 2.0885728997983e-10 0.0065 0.0066 feat0037 8635 7153 402 1495 4676 5644 2051 2167 3634.35 5160 2109 0.41 -1.287 4.69783068469199e-23 5.35404628892905e-22 0.0072 0.0066 feat0038 4477 3444 300 1052 2425 2717 1530 1525 2049.22 2571 1528 0.594 -0.751 2.19040743088845e-09 8.51646681951008e-09 0.0064 0.007 feat0039 6440 5132 596 2329 3488 4049 3041 3375 3488.12 3768 3208 0.855 -0.226 0.0672581095710166 0.0933260529630974 0.0068 0.0066 feat0040 5485 4982 547 2128 2970 3931 2791 3084 3193.92 3450 2938 0.854 -0.227 0.115235265499144 0.152199325426812 0.0094 0.0065 feat0041 3402 2896 247 897 1842 2285 1260 1300 1671.83 2064 1280 0.622 -0.685 1.62434624517133e-06 4.54508419990783e-06 0.0084 0.0076 feat0042 1044 469 188 525 565 370 959 761 663.84 468 860 1.816 0.861 0.000132405493783312 0.000287311975735473 0.0215 0.014 feat0043 36527 36221 6038 22662 19782 28578 30803 32842 28001.22 24180 31822 1.316 0.397 0.0194165949326836 0.0298298595383349 0.0137 0.0093 feat0044 4504 2857 327 1305 2439 2254 1668 1891 2063.19 2346 1780 0.764 -0.388 0.00189978503493442 0.00346640350469629 0.0065 0.007 feat0045 7438 5715 476 1364 4028 4509 2428 1977 3235.57 4268 2202 0.511 -0.968 2.37668736210636e-13 1.31936831580991e-12 0.0075 0.0065 feat0046 10250 6115 728 2932 5551 4825 3714 4249 4584.68 5188 3982 0.77 -0.376 0.00245357228761566 0.00440093969514827 0.007 0.0068 feat0047 9183 4952 869 2153 4973 3907 4433 3120 4108.42 4440 3776 0.845 -0.243 0.142522304913014 0.183903476980215 0.0126 0.0066 feat0048 10881 7247 1080 3366 5893 5718 5510 4878 5499.57 5806 5194 0.892 -0.165 0.161080152413612 0.205186967566098 0.0063 0.007 feat0049 7853 4816 725 2602 4253 3800 3699 3771 3880.54 4026 3735 0.928 -0.108 0.34878554757062 0.408087811578803 0.0059 0.0066 feat0050 9532 5400 856 2303 5162 4261 4367 3338 4281.8 4712 3852 0.813 -0.299 0.0408628505510545 0.0590488603330861 0.0098 0.0067 feat0051 5450 3574 879 2924 2952 2820 4484 4237 3623.29 2886 4360 1.508 0.593 1.50231918411264e-07 4.74432279063759e-07 0.0056 0.0066 feat0052 2764 2082 462 1433 1497 1643 2357 2077 1893.3 1570 2217 1.404 0.49 0.000134221940956685 0.000290856861975056 0.0069 0.0072 feat0053 9621 4999 1491 4811 5210 3944 7606 6972 5933.29 4577 7289 1.59 0.669 3.14840597118924e-06 8.5015510864937e-06 0.0095 0.0071 feat0054 4482 2451 412 1411 2427 1934 2102 2045 2126.95 2180 2074 0.949 -0.076 0.583381628992668 0.637035121295357 0.0082 0.0069 feat0055 5535 3634 721 2812 2998 2867 3678 4075 3404.54 2932 3876 1.327 0.408 0.0004041761370408 0.000816875297296638 0.0059 0.0066 feat0056 5645 3471 388 1136 3057 2739 1979 1646 2355.35 2898 1812 0.619 -0.692 1.6767063905226e-07 5.25746919062172e-07 0.0073 0.0067 feat0057 8844 5008 482 1871 4790 3951 2459 2711 3477.82 4370 2585 0.594 -0.752 7.4804990200978e-09 2.72594455817123e-08 0.0074 0.0066 feat0058 7137 5846 1111 3613 3865 4612 5668 5236 4845.35 4238 5452 1.284 0.361 0.00401602199385565 0.00694509890459168 0.0072 0.0068 feat0059 1325 727 68 266 718 574 347 385 505.89 646 366 0.573 -0.804 7.55862392605266e-05 0.000169472529119924 0.0154 0.0155 feat0060 12356 9490 1374 4818 6692 7487 7010 6982 7042.73 7090 6996 0.987 -0.019 0.873081782936799 0.893984500355546 0.0066 0.0073 feat0061 4962 3368 341 1159 2687 2657 1740 1680 2190.95 2672 1710 0.638 -0.648 5.87321925767118e-08 1.93945451202882e-07 0.0058 0.0069 feat0062 4156 2530 310 1311 2251 1996 1581 1900 1932.07 2124 1740 0.828 -0.273 0.0426114869870459 0.0612309210588783 0.0077 0.0071 feat0063 3807 2594 1197 5205 2062 2047 6107 7543 4439.53 2054 6825 3.334 1.737 1.69813562722683e-41 5.7977119805105e-40 0.0072 0.0067 feat0064 7431 5278 748 2944 4024 4164 3816 4266 4067.77 4094 4041 0.991 -0.013 0.907590620279425 0.922433037475767 0.0057 0.0066 feat0065 7383 5931 779 2751 3998 4679 3974 3987 4159.69 4338 3980 0.918 -0.124 0.301490242630291 0.358444908104015 0.0064 0.0067 feat0066 34443 21996 1636 6434 18653 17354 8346 9324 13419.51 18004 8835 0.491 -1.025 1.14350954605904e-15 7.58051536574973e-15 0.0075 0.0083 feat0067 8696 5814 520 2044 4709 4587 2653 2962 3727.9 4648 2808 0.607 -0.72 5.07291742606116e-10 2.10401762900503e-09 0.0058 0.0066 feat0068 2267 1218 139 493 1228 961 709 714 903.07 1094 712 0.65 -0.621 0.000349431573134317 0.000713482588368453 0.0121 0.0114 feat0069 4639 2871 371 1319 2512 2265 1893 1912 2145.42 2388 1902 0.796 -0.328 0.00752221830562887 0.0124044872763843 0.0063 0.0069 feat0070 7759 4696 325 1101 4202 3705 1658 1596 2790.17 3954 1627 0.41 -1.285 1.55787363196044e-24 1.94856678337191e-23 0.0064 0.0066 feat0071 6579 3891 267 1156 3563 3070 1362 1675 2417.58 3316 1518 0.463 -1.11 1.6271980228289e-15 1.06713604877196e-14 0.0081 0.0067 feat0072 5871 3789 495 1793 3180 2989 2525 2598 2823.18 3084 2562 0.832 -0.266 0.0216004254522889 0.0329178897457775 0.0057 0.0066 feat0073 5652 3527 323 1268 3061 2783 1648 1838 2332.27 2922 1743 0.6 -0.736 3.58251275858557e-09 1.36097846201281e-08 0.0065 0.0067 feat0074 4740 3364 508 1856 2567 2654 2592 2690 2625.62 2610 2641 1.014 0.019 0.866395755670302 0.888739940213702 0.0057 0.0066 feat0075 3061 2375 395 1418 1658 1874 2015 2055 1900.42 1766 2035 1.154 0.207 0.0993952343557483 0.133000687855337 0.0066 0.0072 feat0076 7774 5396 514 1672 4210 4257 2622 2423 3378.19 4234 2522 0.593 -0.753 5.23462410035756e-11 2.38632863715441e-10 0.0056 0.0066 feat0077 2711 1838 743 2997 1468 1450 3790 4343 2763.02 1459 4066 2.799 1.485 4.08206668376275e-34 8.8091865573257e-33 0.0063 0.0066 feat0078 72144 40417 10909 37211 39071 31888 55653 53927 45134.7 35480 54790 1.544 0.627 1.56935897465418e-05 3.87468983344942e-05 0.01 0.0099 feat0079 7796 5438 627 2430 4222 4290 3199 3522 3808.2 4256 3360 0.793 -0.335 0.00303850505871708 0.00536901549135815 0.0056 0.0066 feat0080 6706 4502 405 2060 3632 3552 2066 2985 3058.81 3592 2526 0.711 -0.492 0.00121690539628066 0.00229232356794048 0.0104 0.0065 feat0081 6908 3808 363 1296 3741 3004 1852 1878 2618.91 3372 1865 0.553 -0.854 3.3221578552452e-10 1.40126011338683e-09 0.0079 0.0066 feat0082 6439 3244 435 1435 3487 2559 2219 2080 2586.35 3023 2150 0.709 -0.496 0.0010124210964654 0.00192859430612602 0.0101 0.0066 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feat0091 4867 3812 453 1663 2636 3008 2311 2410 2591.11 2822 2360 0.839 -0.254 0.0385603886696132 0.0560203534644199 0.0065 0.0066 feat0092 11607 7679 412 1335 6286 6059 2102 1935 4095.28 6172 2018 0.325 -1.62 3.15042134969088e-43 1.16800799708961e-41 0.0056 0.0066 feat0093 3199 2176 167 762 1732 1717 852 1104 1351.39 1724 978 0.578 -0.79 7.9611441407674e-08 2.59128075449282e-07 0.0087 0.0086 feat0094 6932 4468 922 3249 3754 3525 4704 4708 4172.86 3640 4706 1.293 0.37 0.000818078808144062 0.00158456706081958 0.0054 0.0067 feat0095 5886 3382 716 2428 3188 2668 3653 3519 3256.85 2928 3586 1.222 0.29 0.0200735598259564 0.0307797163483968 0.0069 0.0065 feat0096 3354 2068 237 732 1816 1632 1209 1061 1429.48 1724 1135 0.651 -0.618 9.1017715963542e-06 2.32812196299028e-05 0.0077 0.0083 feat0097 4324 3608 649 1783 2342 2847 3311 2584 2770.81 2594 2948 1.129 0.174 0.234750030662199 0.286197163818819 0.0097 0.0066 feat0098 6143 3777 1205 4284 3327 2980 6147 6208 4665.66 3154 6178 1.959 0.97 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