# HG changeset patch
# User lionelguy
# Date 1378381325 14400
# Node ID 39bc9c61c55b504dcaf3c75a4ef3c4ccee2f7f9c
# Parent  323490ee1feb8293a95a0d4be612cb9a1d4b4847
Uploaded

diff -r 323490ee1feb -r 39bc9c61c55b prokka.xml
--- a/prokka.xml	Thu Sep 05 04:11:04 2013 -0400
+++ b/prokka.xml	Thu Sep 05 07:42:05 2013 -0400
@@ -4,6 +4,7 @@
     <requirement type="package" version="1.7">prokka</requirement>
     <requirement type="package" version="1.2.36">aragorn</requirement>
     <requirement type="package" version="2.60">prodigal</requirement>
+    <!--<requirement type="package" version="0.1">package_barrnap_0_1</requirement>-->
     <requirement type="package" version="0.1">barrnap</requirement>
     <!-- <requirement type="package" version="4.1">signalp</requirement> -->
     <!-- <requirement type="package" version="3.0">infernal</requirement> -->
@@ -104,6 +105,15 @@
 	   source="both"
 	   level="fatal"
 	   description="Illegal division by zero" />
+    <regex match="no suitable sequence entries"
+	   source="both"
+	   level="fatal"
+	   description="Input contains no suitable sequences" />
+    <regex match="Can't find required"
+	   source="both"
+	   level="fatal"
+	   description="Dependencies not available" />
+   
   </stdio> 
   
   <help>